Evidence map›Paper›PMID 25633040›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

A strategy for tissue self-organization that is robust to cellular heterogeneity and plasticity.

Alec E Cerchiari, James C Garbe, Noel Y Jee, Michael E Todhunter, Kyle E Broaders, Donna M Peehl, Tejal A Desai, Mark A LaBarge, Matthew Thomson, Zev J Gartner

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 125 citations in OpenAlex.

  1. Article
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  8. Measurement of adhesion and traction of cells at high yield reveals an energetic ratchet operating during nephron condensation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
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  12. Article
  13. Engineering Heterogeneous Tumor Models for Biomedical Applications.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Review
  14. Review
  15. Review
  16. Article
  17. Tissue Morphogenesis Through Dynamic Cell and Matrix Interactions.Annual review of cell and developmental biology · 2023
    Review
  18. Article
  19. Article
  20. Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Alec E CerchiariUniversity of California at Berkeley-University of California at San Francisco Graduate Program in Bioengineering, University of California, Berkeley, CA 94720; Departments of Bioengineering and Therapeutic Sciences and Pharmaceutical Chemistry, and.
James C GarbeDepartments of Bioengineering and Therapeutic Sciences and Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720; and.
Noel Y JeePharmaceutical Chemistry, and.
Michael E TodhunterPharmaceutical Chemistry, and.
Kyle E BroadersPharmaceutical Chemistry, and.
Donna M PeehlStanford University School of Medicine, Stanford University, Palo Alto, CA 94305.
Tejal A DesaiUniversity of California at Berkeley-University of California at San Francisco Graduate Program in Bioengineering, University of California, Berkeley, CA 94720; Departments of Bioengineering and Therapeutic Sciences and.
Mark A LaBargeLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720; and.
Matthew ThomsonCenter for Systems and Synthetic Biology, University of California, San Francisco, CA 94143;
Zev J GartnerUniversity of California at Berkeley-University of California at San Francisco Graduate Program in Bioengineering, University of California, Berkeley, CA 94720; Pharmaceutical Chemistry, and Center for Systems and Synthetic Biology, University of California, San Francisco, CA 94143; zev.gartner@ucsf.edu.
University of California, Berkeley · USLawrence Berkeley National Laboratory · USPhytoCeutica (United States) · USStanford University · USUniversity of California, San Francisco · US

Funding

Rewiring Therapeutic Cells: User-Controlled T Cells and Stem CellsP50GM081879 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIM, WENDELL A · 2010 to 2017
$19.0M
RESEARCH TRAINING IN CHEMISTRY AND CHEMICAL BIOLOGYT32GM064337 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2002 to 2021
$7.8M
Total synthesis of the human mammary glandDP2HD080351 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GARTNER, ZEV JORDAN · 2013 to 2013
$2.4M
Age-related shifts in epithelial lineages and tissue homeostasis in mammary gland 5R01AG040081-05R01AG040081 · NIA · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI LABARGE, MARK A · 2011 to 2015
$2.3M
Quantitative models for controlling collective cell fate selection in stem cellsDP5OD012194 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI THOMSON, MATTHEW W. · 2012 to 2016
$1.8M
Intramural NIH HHSNCCDPHP CDC HHS DP2 HD080351-01NIA NIH HHS R01 AG040081NICHD NIH HHS DP2 HD080351NIGMS NIH HHS P50 GM081879NIGMS NIH HHS T32 GM064337NIH HHS DP5 OD012194NIH HHS DP5 OD012194-03
6 · The paper itself

Abstract

Developing tissues contain motile populations of cells that can self-organize into spatially ordered tissues based on differences in their interfacial surface energies. However, it is unclear how self-organization by this mechanism remains robust when interfacial energies become heterogeneous in either time or space. The ducts and acini of the human mammary gland are prototypical heterogeneous and dynamic tissues comprising two concentrically arranged cell types. To investigate the consequences of cellular heterogeneity and plasticity on cell positioning in the mammary gland, we reconstituted its self-organization from aggregates of primary cells in vitro. We find that self-organization is dominated by the interfacial energy of the tissue-ECM boundary, rather than by differential homo- and heterotypic energies of cell-cell interaction. Surprisingly, interactions with the tissue-ECM boundary are binary, in that only one cell type interacts appreciably with the boundary. Using mathematical modeling and cell-type-specific knockdown of key regulators of cell-cell cohesion, we show that this strategy of self-organization is robust to severe perturbations affecting cell-cell contact formation. We also find that this mechanism of self-organization is conserved in the human prostate. Therefore, a binary interfacial interaction with the tissue boundary provides a flexible and generalizable strategy for forming and maintaining the structure of two-component tissues that exhibit abundant heterogeneity and plasticity. Our model also predicts that mutations affecting binary cell-ECM interactions are catastrophic and could contribute to loss of tissue architecture in diseases such as breast cancer.

Indexed as

Cell CommunicationEpithelial CellsExtracellular MatrixHumansMammary Glands, Humancell sortingdifferential adhesionheterogeneitymammaryprostate

Identifiers

PMID25633040
PMCPMC4343104
OpenAlexW2090790734

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.