Evidence map›Paper›PMID 25632877›Full record

ArticleScientific reports2015

Optimized tuning of TALEN specificity using non-conventional RVDs.

Alexandre Juillerat, Coline Pessereau, Gwendoline Dubois, Valérie Guyot, Alan Maréchal, Julien Valton, Fayza Daboussi, Laurent Poirot, Aymeric Duclert, Philippe Duchateau

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Genome Editing and Human Pluripotent Stem Cell Technologies for in vitro Monogenic Diabetes Modeling.Diabetes, metabolic syndrome and obesity : targets and therapy · 2022
    Review
  9. TALENs-an indispensable tool in the era of CRISPR: a mini review.Journal, genetic engineering & biotechnology · 2021
    Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Genome-Editing Technologies: Principles and Applications.Cold Spring Harbor perspectives in biology · 2016
    Review
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Alexandre JuilleratCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Coline PessereauCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Gwendoline DuboisCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Valérie GuyotCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Alan MaréchalCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Julien ValtonCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Fayza DaboussiCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Laurent PoirotCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Aymeric DuclertCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.
Philippe DuchateauCELLECTIS S.A., 8 Rue de la Croix Jarry, 75013 Paris, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A key feature when designing DNA targeting tools and especially nucleases is specificity. The ability to control and tune this important parameter represents an invaluable advance to the development of such molecular scissors. Here, we identified and characterized new non-conventional RVDs (ncRVDs) that possess novel intrinsic targeting specificity features. We further report a strategy to control TALEN targeting based on the exclusion capacities of ncRVDs (discrimination between different nucleotides). By implementing such ncRVDs, we demonstrated in living cells the possibility to efficiently promote TALEN-mediated processing of a target in the HBB locus and alleviate undesired off-site cleavage. We anticipate that this method can greatly benefit to designer nucleases, especially for therapeutic applications and synthetic biology.

Indexed as

Dinucleotide RepeatsGene TargetingBase SequenceCell LineDeoxyribonucleasesHemoglobinsHumansHydrolysisMolecular Sequence DataSubstrate SpecificityYeastsDeoxyribonucleasesHemoglobins

Identifiers

PMID25632877
PMCPMC4311247

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.