Evidence map›Paper›PMID 25632310›Full record

ArticleHereditary cancer in clinical practice2015

Identification of a new BRCA2 large genomic deletion associated with high risk male breast cancer.

Ana Rafaela de Souza Timoteo, Betina Menezes Albuquerque, Patricia Cristina Pascoto Moura, Carlos Cesar de Oliveira Ramos, Lucymara Fassarela Agnez-Lima, Tom Walsh, Mary-Claire King, Tirzah Braz Petta Lajus

Open access · goldAbstract read
In one paragraph

Article in Hereditary cancer in clinical practice, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

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  6. Frequency of Rearrangements Versus Small Indels Mutations inEuropean journal of breast health · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ana Rafaela de Souza TimoteoUniversidade Federal do Rio Grande do Norte, Av. Senador Salgado Filho, s/n, Natal, RN Brazil.
Betina Menezes AlbuquerqueHospital Liga contra o Câncer, Departamento de Mastologia, Natal, RN Brazil.
Patricia Cristina Pascoto MouraHospital Liga contra o Câncer, Departamento de Pesquisa Translacional, Natal, RN Brazil.
Carlos Cesar de Oliveira RamosHospital Liga contra o Câncer, Laboratório de Patologia Cirúrgica, Natal, RN Brazil.
Lucymara Fassarela Agnez-LimaUniversidade Federal do Rio Grande do Norte, Av. Senador Salgado Filho, s/n, Natal, RN Brazil.
Tom WalshUniversity of Washington, Department of Medicine and Genome Sciences, Health Sciences K-160, Seattle, USA.
Mary-Claire KingUniversity of Washington, Department of Medicine and Genome Sciences, Health Sciences K-160, Seattle, USA.
Tirzah Braz Petta LajusHospital Liga contra o Câncer, Departamento de Pesquisa Translacional, Natal, RN Brazil.
Universidade Federal do Rio Grande do Norte · BR

Funding

COMPLETE VARIANT PROFILING OF ALL KNOWN BREAST CANCER GENESR01CA175716 · NCI · UNIVERSITY OF WASHINGTON · PI KING, MARY-CLAIRE, WALSH, TOMAS D · 2013 to 2017
$3.1M
NCI NIH HHS R01 CA175716
6 · The paper itself

Abstract

backgroundMale breast cancer (MBC) is an uncommon disease that has been the focus of limited research. It is estimated that approximately 10% of men with breast cancer have a genetic predisposition, with BRCA2 being the most prevalent genetic mutation. Here we describe the case of MBC in a 64-year-old man who presented on physical examination a nodule in his left breast and declared to have an extensive family history of cancer. METHODS AND

resultsThe patient was firstly diagnosed with an invasive ductal carcinoma (IDC) with histological grade III, nuclear grade 3, pT4N2Mx and positive for hormonal receptors and HER2. Exome sequencing was performed by massive parallel sequencing which had detected a novel BRCA2 germline mutation that is a large genomic deletion of 3,492 nucleotides including BRCA2 exon 14, and this deletion is out of frame and is predicted to lead to a stop codon in exon 15 at codon 2,496.

conclusionLarge rearrangements in BRCA1 and BRCA2 occur in a small percentage (<1%) of patients tested for hereditary breast and ovarian cancer. This is the first report of the mutation del3492 in BRCA2 exon 14, which leads to a truncated protein and therefore is clinically relevant. Mutation segregation analysis should be further done in the Brazilian population. Herein we highlight the importance of next-generation sequencing in the detection of large genomic deletions.

Indexed as

BRCA2 mutationLarge genomic deletionMale Breast Cancer (MBC)Next-generation sequencing

Identifiers

PMID25632310
PMCPMC4308828
OpenAlexW2132852528

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.