Evidence map›Paper›PMID 25632137›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2015

Rescue of impaired long-term facilitation at sensorimotor synapses of Aplysia following siRNA knockdown of CREB1.

Lian Zhou, Yili Zhang, Rong-Yu Liu, Paul Smolen, Leonard J Cleary, John H Byrne

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  4. Molecular and functional characterization of an evolutionarily conserved CREB-binding protein in the Lymnaea CNS.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
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  7. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Lian ZhouDepartment of Neurobiology and Anatomy, The University of Texas Medical School at Houston, Houston, Texas 77030.
Yili ZhangDepartment of Neurobiology and Anatomy, The University of Texas Medical School at Houston, Houston, Texas 77030.ORCID http://orcid.org/0000-0003-4272-494X
Rong-Yu LiuDepartment of Neurobiology and Anatomy, The University of Texas Medical School at Houston, Houston, Texas 77030.
Paul SmolenDepartment of Neurobiology and Anatomy, The University of Texas Medical School at Houston, Houston, Texas 77030.
Leonard J ClearyDepartment of Neurobiology and Anatomy, The University of Texas Medical School at Houston, Houston, Texas 77030.ORCID http://orcid.org/0000-0002-7656-0798
John H ByrneDepartment of Neurobiology and Anatomy, The University of Texas Medical School at Houston, Houston, Texas 77030 John.H.Byrne@uth.tmc.edu.
Texas Medical Center · US

Funding

NEURAL CONTROL OF BEHAVIORR01NS019895 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BYRNE, JOHN H · 1985 to 2022
$8.3M
Modeling Gene Regulation Essential for Long-Term PlasticityR01NS073974 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BYRNE, JOHN H · 2011 to 2015
$1.5M
NINDS NIH HHS R01 NS019895NINDS NIH HHS R01 NS073974
6 · The paper itself

Abstract

Memory impairment is often associated with disrupted regulation of gene induction. For example, deficits in cAMP response element-binding protein (CREB) binding protein (CBP; an essential cofactor for activation of transcription by CREB) impair long-term synaptic plasticity and memory. Previously, we showed that small interfering RNA (siRNA)-induced knockdown of CBP in individual sensory neurons significantly reduced levels of CBP and impaired 5-HT-induced long-term facilitation (LTF) in sensorimotor cocultures from Aplysia. Moreover, computational simulations of the biochemical cascades underlying LTF successfully predicted training protocols that restored LTF following CBP knockdown. We examined whether simulations could also predict a training protocol that restores LTF impaired by siRNA-induced knockdown of the transcription factor CREB1. Simulations based on a previously described model predicted rescue protocols that were specific to CREB1 knockdown. Empirical studies demonstrated that one of these rescue protocols partially restored impaired LTF. In addition, the effectiveness of the rescue protocol was enhanced by pretreatment with rolipram, a selective cAMP phosphodiesterase inhibitor. These results provide further evidence that computational methods can help rescue disruptions in signaling cascades underlying memory formation. Moreover, the study demonstrates that the effectiveness of computationally designed training protocols can be enhanced with complementary pharmacological approaches.

Indexed as

AnimalsAplysiaBiophysicsCoculture TechniquesComputer SimulationCREB-Binding ProteinCyclic AMP-Dependent Protein KinasesElectric StimulationExcitatory Postsynaptic PotentialsLong-Term PotentiationModels, NeurologicalMotor NeuronsRNA, Small InterferingSensory Receptor CellsSerotoninSynapsesCREB-Binding ProteinCyclic AMP-Dependent Protein KinasesRNA, Small InterferingSerotonin

Identifiers

PMID25632137
PMCPMC4308605
OpenAlexW2047936355

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.