Evidence map›Paper›PMID 25631615›Full record

SynthesisGenetic epidemiology2015

Meta-analysis of Genome-Wide Association Studies Identifies Novel Loci Associated With Optic Disc Morphology.

Henriët Springelkamp, Aniket Mishra, Pirro G Hysi, Puya Gharahkhani, René Höhn, Chiea-Chuen Khor, Jessica N Cooke Bailey, Xiaoyan Luo, Wishal D Ramdas, Eranga Vithana and 48 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Genetic epidemiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Review
  6. SIX3 as a Regulator of Development and Disease.Journal of developmental biology · 2026
    Review
  7. Article
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  12. SH-SY5Y human neuronal cells with mutations of theBiochemistry and biophysics reports · 2024
    Article
  13. Article
  14. Article
  15. Polymorphisms in TRIB2 and CAPRIN2 Genes Contribute to the Susceptibility to High Myopia-Induced Cataract in Han Chinese Population.Medical science monitor : international medical journal of experimental and clinical research · 2023
    Article
  16. Article
  17. Optic neuropathy associated with TGFβ dysregulation in mice with a glaucoma-causative mutation of ADAMTS10.Matrix biology : journal of the International Society for Matrix Biology · 2022
    Article
  18. Article
  19. Article
  20. Evaluating statistical significance in aComputational and structural biotechnology journal · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

58 authors.

Henriët SpringelkampDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands; Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands.
Aniket Mishra
Pirro G Hysi
Puya Gharahkhani
René Höhn
Chiea-Chuen Khor
Jessica N Cooke Bailey
Xiaoyan Luo
Wishal D Ramdas
Eranga Vithana
Victor Koh
Seyhan Yazar
Liang Xu
Hannah Forward
Lisa S Kearns
Najaf Amin
Adriana I Iglesias
Kar-Seng Sim
Elisabeth M van Leeuwen
Ayse Demirkan
Sven van der Lee
Seng-Chee Loon
Fernando Rivadeneira
Abhishek Nag
Paul G Sanfilippo
Arne Schillert
Paulus T V M de Jong
Ben A Oostra
André G Uitterlinden
Albert Hofman
NEIGHBORHOOD Consortium
Tiger Zhou
Kathryn P Burdon
Timothy D Spector
Karl J Lackner
Seang-Mei Saw
Johannes R Vingerling
Yik-Ying Teo
Louis R Pasquale
Roger C W Wolfs
Hans G Lemij
E-Shyong Tai
Jost B Jonas
Ching-Yu Cheng
Tin Aung
Nomdo M Jansonius
Caroline C W Klaver
Jamie E Craig
Terri L Young
Jonathan L Haines
Stuart MacGregor
David A Mackey
Norbert Pfeiffer
Tien-Yin Wong
Janey L Wiggs
Alex W Hewitt
Cornelia M van Duijn
Christopher J Hammond

Funding

Novel Glaucoma Diagnostics for Structure and Function - Renewal - 1R01EY013178 · NEI · WILLS EYE HEALTH SYSTEM · PI Joel S Schuman · 2000 to 2026
$17.5M
P30 Core Grant for Vision ResearchP30EY014104 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI Janey L Wiggs · 2002 to 2026
$15.1M
Gene-Environment Interactions in GlaucomaR01EY015473 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI PASQUALE, LOUIS ROBERT · 2005 to 2021
$8.3M
The NEIGHBORHOOD: POAG Heritable Overall Operational DatabaseR01EY022305 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2012 to 2025
$7.9M
VISUAL NEURONS: DEVELOPMENT AND REGENERATION IN VITROR01EY004859 · NEI · JOHNS HOPKINS UNIVERSITY · PI CANTO-SOLER, MARIA VALERIA · 1985 to 2010
$6.2M
MOLECULAR GENETICS OF OPEN ANGLE GLAUCOMAR01EY011405 · NEI · STANFORD UNIVERSITY · PI VOLLRATH, DOUGLAS E. · 1996 to 2011
$4.6M
Dual Leucine Zipper Kinase (DLK) as a Mediator of Retinal Ganglion Cell InjuryR01EY023754 · NEI · JOHNS HOPKINS UNIVERSITY · PI ZACK, DONALD J. · 2013 to 2016
$1.6M
Genomes in Eye Disease: Methods to Query Variants Across Multiple Genome-wide DatR01EY022306 · NEI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GAASTERLAND, THERESA · 2012 to 2014
$1.0M
Department of Health SRF/01/010NEI NIH HHS P30 EY014104NEI NIH HHS R01 EY004859NEI NIH HHS R01 EY013178NEI NIH HHS R01 EY015473NEI NIH HHS R01 EY022305NEI NIH HHS R01 EY022306NEI NIH HHS R01 EY023754
6 · The paper itself

Abstract

Primary open-angle glaucoma is the most common optic neuropathy and an important cause of irreversible blindness worldwide. The optic nerve head or optic disc is divided in two parts: a central cup (without nerve fibers) surrounded by the neuroretinal rim (containing axons of the retinal ganglion cells). The International Glaucoma Genetics Consortium conducted a meta-analysis of genome-wide association studies consisting of 17,248 individuals of European ancestry and 6,841 individuals of Asian ancestry. The outcomes of the genome-wide association studies were disc area and cup area. These specific measurements describe optic nerve morphology in another way than the vertical cup-disc ratio, which is a clinically used measurement, and may shed light on new glaucoma mechanisms. We identified 10 new loci associated with disc area (CDC42BPA, F5, DIRC3, RARB, ABI3BP, DCAF4L2, ELP4, TMTC2, NR2F2, and HORMAD2) and another 10 new loci associated with cup area (DHRS3, TRIB2, EFEMP1, FLNB, FAM101, DDHD1, ASB7, KPNB1, BCAS3, and TRIOBP). The new genes participate in a number of pathways and future work is likely to identify more functions related to the pathogenesis of glaucoma.

Indexed as

Genome-Wide Association StudyAsian PeopleGlaucomaHumansOptic DiskOptic Nerve DiseasesQuantitative Trait LociWhite Peoplecup areadisc areaglaucomaGWAS

Identifiers

PMID25631615
PMCPMC4480365

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.