Evidence map›Paper›PMID 25631572›Full record

ArticleJournal of the Royal Society, Interface2015

Mathematical modelling of diurnal regulation of carbohydrate allocation by osmo-related processes in plants.

Alexandra Pokhilko, Oliver Ebenhöh

Open access · hybridAbstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Effect of osmo priming on sucrose metabolism in spring maize, during the period of grain filling, under limited irrigation conditions.Physiology and molecular biology of plants : an international journal of functional plant biology · 2019
    Article
  5. Article
  6. The Importance of the Circadian Clock in Regulating Plant Metabolism.International journal of molecular sciences · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 2 countries.

Alexandra PokhilkoInstitute for Complex Systems and Mathematical Biology, University of Aberdeen, Meston Building, King's College, Aberdeen, UK.
Oliver EbenhöhInstitute for Complex Systems and Mathematical Biology, University of Aberdeen, Meston Building, King's College, Aberdeen, UK Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich-Heine-University, Universitätsstraße 1, Dusseldorf 40225, Germany oliver.ebenhoeh@uni_duesseldorf.de.
University of Aberdeen · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants synthesize sucrose in source tissues (mainly mature leafs) and supply it for growth of sink tissues (young leafs). Sucrose is derived from photosynthesis during daytime and from starch at night. Because the diurnal regulation of sucrose fluxes is not completely understood, we built a mathematical model designed to reproduce all key experimental observations. For this, assumptions were made about the molecular mechanisms underlying the regulations, which are all motivated by experimental facts. The key regulators in our model are two kinases (SnRK1 and osmo-sensitive kinase OsmK) under the control of the circadian clock. SnRK1 is activated in the night to prepare for regularly occurring carbon-limiting conditions, whereas OsmK is activated during the day to prepare for water deficit, which often occurs in the afternoon. Decrease of SnRK1 and increase of OsmK result in partitioning of carbon towards sucrose to supply growing sink tissues. Concomitantly, increasing levels of the growth regulator trehalose-6-phosphate stimulates the development of new sink tissues and thus sink demand, which further activates sucrose supply in a positive feedback loop. We propose that OsmK acts as a timer to measure the length of the photoperiod and suggest experiments how this hypothesis can be validated.

Indexed as

OsmosisPlant Physiological PhenomenaArabidopsisArabidopsis ProteinsCarbohydratesCarbonCell DifferentiationCircadian ClocksCircadian RhythmFeedback, PhysiologicalModels, TheoreticalPhosphotransferasesPhotoperiodPhotosynthesisPlant LeavesSignal TransductionArabidopsis ProteinsCarbohydratesCarbonPhosphotransferasesSucroseSugar PhosphatesTrehalosetrehalose-6-phosphatecarbohydrate metabolismcircadian clockmathematical modellingplant physiologysystems biology

Identifiers

PMID25631572
PMCPMC4345503
OpenAlexW1995100937

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.