Evidence map›Paper›PMID 25629610›Full record

ArticlePloS one2015

Molecular epidemiology of tuberculosis in Kaohsiung City located at southern Taiwan, 2000-2008.

Yih-Yuan Chen, Jia-Ru Chang, Shu-Chen Kuo, Fan-Chen Tseng, Wei-Chen Huang, Tsi-Shu Huang, Yao-Shen Chen, Tzong-Shi Chiueh, Jun-Ren Sun, Ih-Jen Su and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Yih-Yuan ChenNational Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan, Miaoli, Taiwan; Department of Internal Medicine, Ditmanson Medical Foundation Chiayi Christian Hospital, Chiaya City, Taiwan.
Jia-Ru ChangNational Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan, Miaoli, Taiwan.
Shu-Chen KuoNational Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan, Miaoli, Taiwan.
Fan-Chen TsengNational Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan, Miaoli, Taiwan; Graduate Institute of Basic Medical Science, China Medical University, Taichung, Taiwan.
Wei-Chen HuangNational Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan, Miaoli, Taiwan.
Tsi-Shu HuangDepartment of Microbiology, Kaohsiung Veterans General Hospital, Kaohsiung, Taiwan.
Yao-Shen ChenDepartment of Microbiology, Kaohsiung Veterans General Hospital, Kaohsiung, Taiwan.
Tzong-Shi ChiuehDivision of Clinical Pathology, Department of Pathology, Tri-Service General Hospital and National Defense Medical Center, Taipei, Taiwan.
Jun-Ren SunDivision of Clinical Pathology, Department of Pathology, Tri-Service General Hospital and National Defense Medical Center, Taipei, Taiwan.
Ih-Jen SuNational Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan, Miaoli, Taiwan.
Horng-Yunn DouNational Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan, Miaoli, Taiwan.
National Health Research Institutes · TWKaohsiung Veterans General Hospital · TWChina Medical University · TWNational Defense Medical Center · TWTri-Service General Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe present the first comprehensive analysis of Mycobacterium tuberculosis (MTB) isolates circulating in southern Taiwan. In this 9-year population-based study, the TB situation in the Kaohsiung region was characterized by genotypic analysis of 421 MTB isolates.

methodsAll 421 isolates of MTB were analyzed by spoligotyping and MIRU-VNTR typing. Drug-resistance patterns were also analyzed.

resultsThe percentage of EAI (East African-Indian) strains increased across sampling years (2000-2008) in southern Taiwan, whereas the proportion of Beijing lineages remained unchanged. Clustering was more frequent with EAI genotype infections (odds ratio = 3.6, p<0.0001) when compared to Beijing genotypes. Notably, MTB resistance to streptomycin (STR) had significantly increased over time, but resistance to other antibiotics, including multidrug resistance, had not. Three major genes (gidB, rpsL and rrs) implicated in STR resistance were sequenced and specific mutations identified.

conclusionsThis study revealed that EAI strains were highly transmissible and that STR resistance has increased between 2000 and 2008 in Kaohsiung, Taiwan.

Indexed as

Anti-Bacterial AgentsBacterial Typing TechniquesDrug Resistance, BacterialGenome, BacterialHumansMolecular EpidemiologyMycobacterium tuberculosisPolymorphism, Single NucleotideRetrospective StudiesStreptomycinTaiwanTuberculosisAnti-Bacterial AgentsStreptomycin

Identifiers

PMID25629610
PMCPMC4309396
OpenAlexW1967267416

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.