Evidence map›Paper›PMID 25629598›Full record

ReviewRNA biology2014

Diversity of the biosynthesis pathway for threonylcarbamoyladenosine (t(6)A), a universal modification of tRNA.

Patrick C Thiaville, Dirk Iwata-Reuyl, Valérie de Crécy-Lagard

Abstract readReview
In one paragraph

Review in RNA biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed.

  1. Article
  2. Catalytic and regulatory basis of tRNA tNature communications · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Yeast adapts to diverse ecological niches driven by genomics and metabolic reprogramming.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Patrick C Thiavillea Genetics and Genomics Graduate Program ; University of Florida ; Gainesville , FL USA.
Dirk Iwata-Reuyl
Valérie de Crécy-Lagard

Funding

Synthesis and function of Queuosine in BacteriaR01GM070641 · NIGMS · UNIVERSITY OF FLORIDA · PI DE CRECY-LAGARD, VALERIE A · 2006 to 2023
$5.3M
NIGMS NIH HHS R01 GM70641
6 · The paper itself

Abstract

The tRNA modification field has a rich literature covering biochemical analysis going back more than 40 years, but many of the corresponding genes were only identified in the last decade. In recent years, comparative genomic-driven analysis has allowed for the identification of the genes and subsequent characterization of the enzymes responsible for N6-threonylcarbamoyladenosine (t(6)A). This universal modification, located in the anticodon stem-loop at position 37 adjacent to the anticodon of tRNAs, is found in nearly all tRNAs that decode ANN codons. The t(6)A biosynthesis enzymes and synthesis pathways have now been identified, revealing both a core set of enzymes and kingdom-specific variations. This review focuses on the elucidation of the pathway, diversity of the synthesis genes, and proposes a new nomenclature for t(6)A synthesis enzymes.

Indexed as

RNA Processing, Post-TranscriptionalAdenosineAnticodonArchaeal ProteinsCodonEscherichia coliEscherichia coli ProteinsHaloferax volcaniiHumansNucleic Acid ConformationRNA-Binding ProteinsRNA, TransferSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTelomeraseAdenosineAnticodonArchaeal ProteinsCodonEscherichia coli ProteinsKEOPS complex, S cerevisiaeN(6)-(N-threonylcarbonyl)adenosineRNA-Binding ProteinsRNA, TransferSaccharomyces cerevisiae ProteinsTelomeraseTERT protein, humanYrdC protein, E colicomparative genomicsmodified nucleosidest6AtranslationtRNAuniversal proteins

Identifiers

PMID25629598
PMCPMC4615747

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.