Evidence map›Paper›PMID 25628758›Full record

ArticleMolecular cytogenetics2015

Construction of cytogenetic map of Gossypium herbaceum chromosome 1 and its integration with genetic maps.

Xinglei Cui, Fang Liu, Yuling Liu, Zhongli Zhou, Yanyan Zhao, Chunying Wang, Xingxing Wang, Xiaoyan Cai, Yuhong Wang, Fei Meng and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecular cytogenetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  5. Cytogenetic maps of homoeologous chromosomes AComparative cytogenetics · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Xinglei CuiState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Fang LiuState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Yuling LiuState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Zhongli ZhouState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Yanyan ZhaoState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Chunying WangState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Xingxing WangState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Xiaoyan CaiState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Yuhong WangState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Fei MengState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Renhai PengState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China ; Anyang Institute of Technology, Anyang, Henan 455000 China.
Kunbo WangState Key Laboratory of Cotton Biology (China)/Institute of Cotton Research of Chinese Academy of Agricultural Science, Anyang, Henan 455000 China.
Cotton Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCytogenetic map can provide not only information of the genome structure, but also can build a solid foundation for genetic research. With the developments of molecular and cytogenetic studies in cotton (Gossypium), the construction of cytogenetic map is becoming more and more imperative.

resultsA cytogenetic map of chromosome 1 (A101) of Gossypium herbaceum (A1) which includes 10 bacterial artificial chromosome (BAC) clones was constructed by using fluorescent in situ hybridization (FISH). Meanwhile, comparison and analysis were made for the cytogenetic map of chromosome 1 (A101) of G. herbaceum with four genetic linkage maps of chromosome 1 (Ah01) of G. hirsutum ((AD)1) and one genetic linkage map of chromosome 1 of (A101) G. arboreum (A2). The 10 BAC clones were also used to be localized on G. raimondii (D5) chromosome 1 (D501), and 2 of them showed clear unique hybridized signals. Furthermore, these 2 BAC clones were also shown localized on chromosome 1 of both A sub-genome and D sub-genome of G. hirsutum.

conclusionThe comparison of the cytogenetic map with genetic linkage maps showed that most of the identified marker-tagged BAC clones appearing same orders in different maps except three markers showing different positions, which might indicate chromosomal segmental rearrangements. The positions of the 2 BAC clones which were localized on Ah01 and Dh01 chromosomes were almost the same as that on A101 and D501 chromosomes. The corresponding anchored SSR markers of these 2 BAC clones were firstly found to be localized on chromosome D501 (Dh01) as they were not seen mapped like this in any genetic map reported.

Indexed as

BAC-FISHCottonCytogenetic map

Identifiers

PMID25628758
PMCPMC4307992
OpenAlexW2132846992

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.