Evidence map›Paper›PMID 25626964›Full record

ArticleEnvironmental microbiology2015

The bacterial alarmone (p)ppGpp is required for virulence and controls cell size and survival of Pseudomonas syringae on plants.

Tiyakhon Chatnaparat, Zhong Li, Schuyler S Korban, Youfu Zhao

Open access · greenAbstract read
In one paragraph

Article in Environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
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  9. Virulence-related regulatory network ofComputational and structural biotechnology journal · 2022
    Review
  10. Article
  11. Review
  12. The extended (p)ppGpp family: New dimensions in Stress response.Current research in microbial sciences · 2021
    Review
  13. Extraction and detection of guanosine 5'-diphosphate-3'-diphosphate in amino acid starvation cells of Clavibacter michiganensis.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Article
  14. Regulation of theMicroorganisms · 2021
    Review
  15. Review
  16. Article
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  18. Article
  19. Signal transduction schemes inComputational and structural biotechnology journal · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Tiyakhon ChatnaparatDepartment of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Zhong LiMetabolomics Center, Roy J. Carver Biotechnology Center, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Schuyler S KorbanDepartment of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Youfu ZhaoDepartment of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
University of Illinois Urbana-Champaign · USUniversity of Massachusetts Boston · US

Funding

Acquisition of a Triple Quadrupole Mass SpectrometerS10RR024516 · NCRR · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI LI, ZHONG · 2009 to 2009
$469k
NCRR NIH HHS S10 RR024516
6 · The paper itself

Abstract

The stringent response, mediated by second messenger (p)ppGpp, results in swift and massive transcriptional reprogramming under nutrient limited conditions. In this study, the role of (p)ppGpp on virulence of Pseudomonas syringae pv. syringae B728a (PssB728a) was investigated. The virulence of the relA/spoT (ppGpp(0) ) double mutant was completely impaired on bean, and bacterial growth was significantly reduced, suggesting that (p)ppGpp is required for full virulence of P. syringae. Expression of T3SS and other virulence genes was reduced in ppGpp(0) mutants. In addition, ppGpp deficiency resulted in loss of swarming motility, reduction of pyoverdine production, increased sensitivity to oxidative stress and antibiotic tolerance, as well as reduced ability to utilize γ-amino butyric acid. Increased levels of ppGpp resulted in reduced cell size of PssB728a when grown in a minimal medium and on plant surfaces, while most ppGpp(0) mutant cells were not viable on plant surfaces 24 h after spray inoculation, suggesting that ppGpp-mediated stringent response temporarily limits cell growth, and might control cell survival on plants by limiting their growth. These results demonstrated that ppGpp-mediated stringent response plays a central role in P. syringae virulence and survival and indicated that ppGpp serves as a global signal for regulating various virulence traits in PssB728a.

Indexed as

Bacterial ProteinsDrug Resistance, BacterialGuanosine PentaphosphateGuanosine TetraphosphateOligopeptidesOxidative StressPlant DiseasesPlant LeavesPlantsPseudomonas syringaeSecond Messenger SystemsVirulenceVirulence FactorsBacterial ProteinsGuanosine PentaphosphateGuanosine TetraphosphateOligopeptidespyoverdinVirulence Factors

Identifiers

PMID25626964
PMCPMC4758678
OpenAlexW1564025648

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.