Evidence map›Paper›PMID 25623024›Full record

ArticleMolecules and cells2015

Azasugar-containing phosphorothioate oligonucleotide (AZPSON) DBM-2198 inhibits human immunodeficiency virus type 1 (HIV-1) replication by blocking HIV-1 gp120 without affecting the V3 region.

Jinjoo Lee, Se Eun Byeon, Ju Yeol Jung, Myeong-Ho Kang, Yu-Jin Park, Kyeong-Eun Jung, Yong-Soo Bae

Open access · diamondAbstract read
In one paragraph

Article in Molecules and cells, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Phosphorothioated DNA Is Shielded from Oxidative Damage.Applied and environmental microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jinjoo LeeDepartment of Biological Science, Sungkyunkwan University, Suwon 446-740, Korea.
Se Eun ByeonDepartment of Biological Science, Sungkyunkwan University, Suwon 446-740, Korea.
Ju Yeol JungDepartment of Biological Science, Sungkyunkwan University, Suwon 446-740, Korea.
Myeong-Ho KangDepartment of Biological Science, Sungkyunkwan University, Suwon 446-740, Korea.
Yu-Jin ParkDepartment of Biological Science, Sungkyunkwan University, Suwon 446-740, Korea.
Kyeong-Eun JungDepartment of Biological Science, Sungkyunkwan University, Suwon 446-740, Korea.
Yong-Soo BaeDepartment of Biological Science, Sungkyunkwan University, Suwon 446-740, Korea.
Sungkyunkwan University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DBM-2198, a six-membered azasugar nucleotide (6-AZN)-containing phosphorothioate (P = S) oligonucleotide (AZPSON), was described in our previous publication [Lee et al. (2005)] with regard to its antiviral activity against a broad spectrum of HIV-1 variants. This report describes the mechanisms underlying the anti-HIV-1 properties of DBM-2198. The LTR-mediated reporter assay indicated that the anti-HIV-1 activity of DBM-2198 is attributed to an extracellular mode of action rather than intracellular sequence-specific antisense activity. Nevertheless, the antiviral properties of DBM-2198 and other AZPSONs were highly restricted to HIV-1. Unlike other P = S oligonucleo-tides, DBM-2198 caused no host cell activation upon administration to cultures. HIV-1 that was pre-incubated with DBM-2198 did not show any infectivity towards host cells whereas host cells pre-incubated with DBM-2198 remained susceptible to HIV-1 infection, suggesting that DBM-2198 acts on the virus particle rather than cell surface molecules in the inhibition of HIV-1 infection. Competition assays for binding to HIV-1 envelope protein with anti-gp120 and anti-V3 antibodies revealed that DBM-2198 acts on the viral attachment site of HIV-1 gp120, but not on the V3 region. This report provides a better understanding of the antiviral mechanism of DBM-2198 and may contribute to the development of a potential therapeutic drug against a broad spectrum of HIV-1 variants.

Indexed as

AnimalsAnti-HIV AgentsCell LineChlorocebus aethiopsCOS CellsGene Expression Regulation, ViralHeLa CellsHIV-1HIV Envelope Protein gp120HumansJurkat CellsOligodeoxyribonucleotidesPhosphorothioate OligonucleotidesPiperidinesVirus AttachmentVirus ReplicationAnti-HIV AgentsDBM 2198gp120 protein, Human immunodeficiency virus 1HIV Envelope Protein gp120OligodeoxyribonucleotidesPhosphorothioate OligonucleotidesPiperidinesanti-HIV-1 mechanismDBM-2198gp120six-membered azasugar nucleotide (6-AZN)-containing phosphorothioate (P = S) oligonucleotide (AZPSON)V3

Identifiers

PMID25623024
PMCPMC4332031
OpenAlexW2159103092

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.