Evidence map›Paper›PMID 25620548›Full record

ArticleCell host & microbe2015

MyD88 signaling in T cells directs IgA-mediated control of the microbiota to promote health.

Jason L Kubinak, Charisse Petersen, W Zac Stephens, Ray Soto, Erin Bake, Ryan M O'Connell, June L Round

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 201 papers.

0numbers the graph read from it
0cells of the map it votes in
201citing papers in PubMed
13.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

201 citing papers in PubMed, 332 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. The island biology of the host microbiome.Trends in microbiology · 2026
    Review
  6. Article
  7. AbioRxiv : the preprint server for biology · 2026
    Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. The Biology ofAnnual review of microbiology · 2025
    Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article

141 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jason L KubinakDepartment of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Charisse PetersenDepartment of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
W Zac StephensDepartment of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Ray SotoDepartment of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Erin BakeDepartment of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Ryan M O'ConnellDepartment of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
June L RoundDepartment of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA. Electronic address: june.round@path.utah.edu.
University of Utah · US

Funding

PILOT AND FEASIBILITY STUDIESP30DK034987 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROBERT S. SANDLER · 1985 to 2026
$30.5M
National Gnotobiotic Rodent Resource CenterP40OD010995 · OD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Ryan B Sartor · 2012 to 2026
$9.7M
TRAINING PROGRAM IN GENETICST32GM007464 · NIGMS · UNIVERSITY OF UTAH · PI GRUNWALD, DAVID J., STANFIELD, GILLIAN · 1985 to 2020
$6.1M
Training Program in Microbial PathogenesisT32AI055434 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI MULVEY, MATTHEW A, PLANELLES, VICENTE · 2004 to 2025
$6.0M
Developing therapies to target the microbiotaDP2AT008746 · NCCIH · UNIVERSITY OF UTAH · PI ROUND, JUNE LOUISE · 2014 to 2014
$2.2M
Utilizing TALEN technology to regulate human microRNA'sDP2GM111099 · NIGMS · UNIVERSITY OF UTAH · PI O'CONNELL, RYAN M · 2013 to 2013
$2.2M
Investigate the Role of Micro-RNA 155 in Myeloid Development during InflammationR00HL102228 · NHLBI · UNIVERSITY OF UTAH · PI O'CONNELL, RYAN M · 2011 to 2013
$654k
Univ of Utah Cell Sorter for Flow Cytometry CoreS10RR026802 · NCRR · UNIVERSITY OF UTAH · PI GREEN, WAYNE FRANCIS · 2010 to 2010
$500k
Exploring the function of a novel, microbiota-regulated gene in T cellsR21AI109122 · NIAID · UNIVERSITY OF UTAH · PI ROUND, JUNE LOUISE · 2014 to 2015
$410k
The role of T cell intrinsic TLR signaling on host-commensal interactionsR56AI107090 · NIAID · UNIVERSITY OF UTAH · PI ROUND, JUNE LOUISE · 2013 to 2013
$350k
Exploring the mechanisms of T cell intrinsic TLR2 signaling on Treg functionK22AI095375 · NIAID · UNIVERSITY OF UTAH · PI ROUND, JUNE LOUISE · 2012 to 2013
$270k
HIV VACCINE PRODUCTIONN01AI095375 · NIAID · SRI INTERNATIONAL · PI KUNG, ADA P · 1999 to 2000
$61k
NCCDPHP CDC HHS DP2GM111099-01NCCIH NIH HHS DP2 AT008746NCCIH NIH HHS DP2AT008746-01NCRR NIH HHS 1S10RR026802-01NCRR NIH HHS S10 RR026802NHLBI NIH HHS R00 HL102228NHLBI NIH HHS R00HL102228-05NIAID NIH HHS AI107090NIAID NIH HHS AI109122NIAID NIH HHS K22 AI095375NIAID NIH HHS K22 AI95375NIAID NIH HHS N01 AI095375NIAID NIH HHS R21 AI109122NIAID NIH HHS R56 AI107090NIAID NIH HHS T32 AI-055434NIAID NIH HHS T32 AI055434NIDDK NIH HHS 5-P39-DK034987NIDDK NIH HHS P30 DK034987NIGMS NIH HHS DP2 GM111099NIGMS NIH HHS T32 GM007464NIH HHS 5-P40-OD010995NIH HHS P40 OD010995
6 · The paper itself

Abstract

Altered commensal communities are associated with human disease. IgA mediates intestinal homeostasis and regulates microbiota composition. Intestinal IgA is produced at high levels as a result of T follicular helper cell (TFH) and B cell interactions in germinal centers. However, the pathways directing host IgA responses toward the microbiota remain unknown. Here, we report that signaling through the innate adaptor MyD88 in gut T cells coordinates germinal center responses, including TFH and IgA+ B cell development. TFH development is deficient in germ-free mice and can be restored by feeding TLR2 agonists that activate T cell-intrinsic MyD88 signaling. Loss of this pathway diminishes high-affinity IgA targeting of the microbiota and fails to control the bacterial community, leading to worsened disease. Our findings identify that T cells converge innate and adaptive immune signals to coordinate IgA against the microbiota, constraining microbial community membership to promote symbiosis.

Indexed as

Signal TransductionAdaptive ImmunityAnimalsB-LymphocytesGastrointestinal MicrobiomeHomeostasisImmunity, InnateImmunoglobulin AIntestinal MucosaMiceMyeloid Differentiation Factor 88T-LymphocytesImmunoglobulin AMYD88 protein, humanMyeloid Differentiation Factor 88

Identifiers

PMID25620548
PMCPMC4451207
OpenAlexW2069296495

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.