Evidence map›Paper›PMID 25620001›Full record

ArticleStructure (London, England : 1993)2015

Structural plasticity of helical nanotubes based on coiled-coil assemblies.

E H Egelman, C Xu, F DiMaio, E Magnotti, C Modlin, X Yu, E Wright, D Baker, V P Conticello

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 120 citations in OpenAlex.

  1. Article
  2. Chemical reviews · 2026
    Review
  3. Designability of α-Helical Protein Filaments.Sub-cellular biochemistry · 2026
    Review
  4. Article
  5. Structure of the virulence-associatedProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Tad and toxin-coregulated pilus structures reveal unexpected diversity in bacterial type IV pili.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Phenol-soluble modulins PSMα3 and PSMβ2 form nanotubes that are cross-α amyloids.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Atomic structure of Lanreotide nanotubes revealed by cryo-EM.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Protein Assembly by Design.Chemical reviews · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

E H EgelmanDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22908, USA. Electronic address: egelman@virginia.edu.
C XuDepartment of Chemistry, Emory University, Atlanta, GA 30322, USA.
F DiMaioDepartment of Biochemistry, University of Washington, Seattle, WA 98195, USA.
E MagnottiDepartment of Chemistry, Emory University, Atlanta, GA 30322, USA.
C ModlinDepartment of Chemistry, Emory University, Atlanta, GA 30322, USA.
X YuDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22908, USA.
E WrightDepartment of Pediatrics, Emory University School of Medicine, Children's Healthcare of Atlanta, Atlanta, GA 30322, USA.
D BakerDepartment of Biochemistry, University of Washington, Seattle, WA 98195, USA.
V P ConticelloDepartment of Chemistry, Emory University, Atlanta, GA 30322, USA. Electronic address: vcontic@emory.edu.
Emory University · USUniversity of Virginia · USUniversity of Washington · US

Funding

Methods for the Analysis of Helical Macromolecular ComplexesR01EB001567 · NIBIB · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI EGELMAN, EDWARD H. · 2003 to 2014
$3.6M
Structure and Function of Prokaryotic Appendages by Cryo-Electron TomographyR01GM104540 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WRIGHT, ELIZABETH R · 2013 to 2017
$1.4M
NIBIB NIH HHS EB001567NIBIB NIH HHS R01 EB001567NIGMS NIH HHS R01 GM104540
6 · The paper itself

Abstract

Numerous instances can be seen in evolution in which protein quaternary structures have diverged while the sequences of the building blocks have remained fairly conserved. However, the path through which such divergence has taken place is usually not known. We have designed two synthetic 29-residue α-helical peptides, based on the coiled-coil structural motif, that spontaneously self-assemble into helical nanotubes in vitro. Using electron cryomicroscopy with a newly available direct electron detection capability, we can achieve near-atomic resolution of these thin structures. We show how conservative changes of only one or two amino acids result in dramatic changes in quaternary structure, in which the assemblies can be switched between two very different forms. This system provides a framework for understanding how small sequence changes in evolution can translate into very large changes in supramolecular structure, a phenomenon that may have significant implications for the de novo design of synthetic peptide assemblies.

Indexed as

Evolution, MolecularModels, MolecularAmino Acid SequenceCryoelectron MicroscopyImage Processing, Computer-AssistedMolecular Sequence DataNanotubesPeptidesSpectrophotometrySynchrotronsPeptides

Identifiers

PMID25620001
PMCPMC4318749
OpenAlexW2146886181

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.