Evidence map›Paper›PMID 25619172›Full record

ArticleScientific reports2015

Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway.

Joana Fraga, Ana Maranha, Vitor Mendes, Pedro José Barbosa Pereira, Nuno Empadinhas, Sandra Macedo-Ribeiro

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
15.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 820 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Joana FragaIBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.
Ana MaranhaCNC - Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Vitor MendesCNC - Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Pedro José Barbosa PereiraIBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.
Nuno EmpadinhasCNC - Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Sandra Macedo-RibeiroIBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.
Universidade do Porto · PTUniversity of Coimbra · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel four-step pathway identified recently in mycobacteria channels trehalose to glycogen synthesis and is also likely involved in the biosynthesis of two other crucial polymers: intracellular methylglucose lipopolysaccharides and exposed capsular glucan. The structures of three of the intervening enzymes - GlgB, GlgE, and TreS - were recently reported, providing the first templates for rational drug design. Here we describe the structural characterization of the fourth enzyme of the pathway, mycobacterial maltokinase (Mak), uncovering a eukaryotic-like kinase (ELK) fold, similar to methylthioribose kinases and aminoglycoside phosphotransferases. The 1.15 Å structure of Mak in complex with a non-hydrolysable ATP analog reveals subtle structural rearrangements upon nucleotide binding in the cleft between the N- and the C-terminal lobes. Remarkably, this new family of ELKs has a novel N-terminal domain topologically resembling the cystatin family of protease inhibitors. By interfacing with and restraining the mobility of the phosphate-binding region of the N-terminal lobe, Mak's unusual N-terminal domain might regulate its phosphotransfer activity and represents the most likely anchoring point for TreS, the upstream enzyme in the pathway. By completing the gallery of atomic-detail models of an essential pathway, this structure opens new avenues for the rational design of alternative anti-tubercular compounds.

Indexed as

Protein Structure, QuaternaryAdenosine TriphosphateGlucosyltransferasesKineticsMetabolic Networks and PathwaysMycobacterium tuberculosisPhosphotransferases (Alcohol Group Acceptor)PhylogenyProtein FoldingAdenosine TriphosphateGlucosyltransferasesmaltokinasePhosphotransferases (Alcohol Group Acceptor)

Identifiers

PMID25619172
PMCPMC4306142
OpenAlexW1966729619

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.