Evidence map›Paper›PMID 25617626›Full record

ArticlePloS one2015

JAK2 exon 14 skipping in patients with primary myelofibrosis: a minor splice variant modulated by the JAK2-V617F allele burden.

Paolo Catarsi, Vittorio Rosti, Giacomo Morreale, Valentina Poletto, Laura Villani, Roberto Bertorelli, Matteo Pedrazzini, Michele Zorzetto, Giovanni Barosi, AGIMM investigators

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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  5. The Contribution ofInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Paolo CatarsiCenter for the Study and Treatment of Myelofibrosis, Biotechnology Research Laboratories, Fondazione IRCCS "Policlinico San Matteo", Pavia (PV), Italy.
Vittorio RostiCenter for the Study and Treatment of Myelofibrosis, Biotechnology Research Laboratories, Fondazione IRCCS "Policlinico San Matteo", Pavia (PV), Italy.
Giacomo MorrealeViticulture Research Center, Consiglio per la Ricerca e la sperimentazione in Agricoltura, Conegliano (TV), Italy.
Valentina PolettoCenter for the Study and Treatment of Myelofibrosis, Biotechnology Research Laboratories, Fondazione IRCCS "Policlinico San Matteo", Pavia (PV), Italy.
Laura VillaniCenter for the Study and Treatment of Myelofibrosis, Biotechnology Research Laboratories, Fondazione IRCCS "Policlinico San Matteo", Pavia (PV), Italy.
Roberto BertorelliLaboratory of Biomolecular Sequence and Structure Analysis for Health, Fondazione "Bruno Kessler", Trento (TN), Italy.
Matteo PedrazziniCardiovascular Genetics Laboratory, Biomedical and Technology Research Centre, Istituto Auxologico Italiano, Cusano Milanino (MI), Italy.
Michele ZorzettoLaboratory of Biochemistry and Genetics, Division of Pneumology, Department of Molecular Medicine, Fondazione IRCCS "Policlinico San Matteo", Pavia (PV), Italy.
Giovanni BarosiCenter for the Study and Treatment of Myelofibrosis, Biotechnology Research Laboratories, Fondazione IRCCS "Policlinico San Matteo", Pavia (PV), Italy.
AGIMM investigators
Centro di Ricerca per l’Orticoltura · ITIRCCS Istituto Auxologico Italiano · ITPoliclinico San Matteo Fondazione · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrimary myelofibrosis (PMF) is an acquired clonal disease of the hematopoietic stem cell compartment, characterized by bone marrow fibrosis, anemia, splenomegaly and extramedullary hematopoiesis. About 60% of patients with PMF harbor a somatic mutation of the JAK2 gene (JAK2-V617F) in their hematopoietic lineage. Recently, a splicing isoform of JAK2, lacking exon 14 (JAK2Δ14) was described in patients affected by myeloproliferative diseases. MATERIALS AND

methodsBy using a specific RT-qPCR method, we measured the ratio between the splicing isoform and the JAK2 full-length transcript (JAK2+14) in granulocytes, isolated from peripheral blood, of forty-four patients with PMF and nine healthy donors.

resultsWe found that JAK2Δ14 was only slightly increased in patients and, at variance with published data, the splicing isoform was also detectable in healthy controls. We also found that, in patients bearing the JAK2-V617F mutation, the percentage of mutated alleles correlated with the observed increase in JAK2Δ14. Homozygosity for the mutation was also associated with a higher level of JAK2+14. Bioinformatic analysis indicates the possibility that the G>T transversion may interfere with the correct splicing of exon 14 by modifying a splicing regulatory sequence.

conclusionsIncreased levels of JAK2 full-length transcript and a small but significant increase in JAK2 exon 14 skipping, are associated with the JAK2-V617F allele burden in PMF granulocytes. Our data do not confirm a previous claim that the production of the JAK2Δ14 isoform is related to the pathogenesis of PMF.

Indexed as

RNA SplicingCell LineComputational BiologyExonsGene Expression ProfilingHumansJanus Kinase 2MutationPrimary MyelofibrosisRegression AnalysisSequence DeletionJAK2 protein, humanJanus Kinase 2

Identifiers

PMID25617626
PMCPMC4305294
OpenAlexW2007588113

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.