Evidence map›Paper›PMID 25616249›Full record

ArticleMagnetic resonance in chemistry : MRC2015

Chemoselective detection and discrimination of carbonyl-containing compounds in metabolite mixtures by 1H-detected 15N nuclear magnetic resonance.

Andrew N Lane, Sengodagounder Arumugam, Pawel K Lorkiewicz, Richard M Higashi, Sébastien Laulhé, Michael H Nantz, Hunter N B Moseley, Teresa W-M Fan

Abstract read
In one paragraph

Article in Magnetic resonance in chemistry : MRC, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. NMR-Based Stable Isotope Tracing of Cancer Metabolism.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  2. Review
  3. Review
  4. NMR Analysis of Carboxylate Isotopomers ofAnalytical chemistry · 2021
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Stable Isotope-Resolved Metabolomics by NMR.Methods in molecular biology (Clifton, N.J.) · 2019
    Article
  10. Article
  11. Review
  12. Review
  13. The future of NMR-based metabolomics.Current opinion in biotechnology · 2017
    Review
  14. Recent Advances in NMR-Based Metabolomics.Analytical chemistry · 2017
    Review
  15. Review
  16. Applications of NMR spectroscopy to systems biochemistry.Progress in nuclear magnetic resonance spectroscopy · 2016
    Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Andrew N LaneCenter for Regulatory and Environmental Analytical Metabolomics, University of Louisville, Louisville, KY, USA; J.G. Brown Cancer Center, University of Louisville, Louisville, KY, USA.
Sengodagounder Arumugam
Pawel K Lorkiewicz
Richard M Higashi
Sébastien Laulhé
Michael H Nantz
Hunter N B Moseley
Teresa W-M Fan

Funding

University of Kentucky Markey Cancer Center Support Grant ECIA SupplementP30CA177558 · NCI · UNIVERSITY OF KENTUCKY · PI KATHLEEN L. O'CONNOR · 2013 to 2026
$38.3M
SAMPLE COREU24DK097215 · NIDDK · UNIVERSITY OF KENTUCKY · PI FAN, TERESA WHEI-MEI, HIGASHI, RICHARD M · 2013 to 2017
$8.7M
Systems Biochemistry in Lung Cancer: Toward a Mechanistic Understanding of NSCLCP01CA163223 · NCI · UNIVERSITY OF LOUISVILLE · PI FAN, TERESA WHEI-MEI, FAN, TERESA WHEI-MEI · 2013 to 2017
$6.5M
Integrated Chemoselective and Informatic Platform for Large-Scale MetabolomicsR01ES022191 · NIEHS · UNIVERSITY OF LOUISVILLE · PI FAN, TERESA WHEI-MEI, HIGASHI, RICHARD M · 2012 to 2016
$3.4M
NCI NIH HHS P01 CA163223NCI NIH HHS P01CA163223-01A1NCI NIH HHS P30 CA177558NIDDK NIH HHS 1 U24 DK097215-01A1NIDDK NIH HHS U24 DK097215NIEHS NIH HHS R01 ES022191NIEHS NIH HHS R01ES022191-01
6 · The paper itself

Abstract

NMR spectra of mixtures of metabolites extracted from cells or tissues are extremely complex, reflecting the large number of compounds that are present over a wide range of concentrations. Although multidimensional NMR can greatly improve resolution as well as improve reliability of compound assignments, lower abundance metabolites often remain hidden. We have developed a carbonyl-selective aminooxy probe that specifically reacts with free keto and aldehyde functions, but not carboxylates. By incorporating (15)N in the aminooxy functional group, (15)N-edited NMR was used to select exclusively those metabolites that contain a free carbonyl function while all other metabolites are rejected. Here, we demonstrate that the chemical shifts of the aminooxy adducts of ketones and aldehydes are very different, which can be used to discriminate between aldoses and ketoses, for example. Utilizing the 2-bond or 3-bond (15)N-(1)H couplings, the (15)N-edited NMR analysis was optimized first with authentic standards and then applied to an extract of the lung adenocarcinoma cell line A549. More than 30 carbonyl-containing compounds at NMR-detectable levels, six of which we have assigned by reference to our database. As the aminooxy probe contains a permanently charged quaternary ammonium group, the adducts are also optimized for detection by mass spectrometry. Thus, this sample preparation technique provides a better link between the two structural determination tools, thereby paving the way to faster and more reliable identification of both known and unknown metabolites directly in crude biological extracts.

Indexed as

AldehydesCell Line, TumorHumansKetonesLung NeoplasmsMolecular Probe TechniquesNitrogen IsotopesProton Magnetic Resonance SpectroscopyReproducibility of ResultsSensitivity and SpecificityAldehydesKetonesNitrogen Isotopes15N-edited 1H NMRaldehydesaminooxy derivativeschemoselectionketonesmetabolomics

Identifiers

PMID25616249
PMCPMC4409496

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.