Evidence map›Paper›PMID 25615817›Full record

ArticleClinical genetics2016

X-chromosomal inactivation directly influences the phenotypic manifestation of X-linked protoporphyria.

V Brancaleoni, M Balwani, F Granata, G Graziadei, P Missineo, V Fiorentino, S Fustinoni, M D Cappellini, H Naik, R J Desnick and 1 more

Abstract read
In one paragraph

Article in Clinical genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

  1. Trial
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  4. Article
  5. Article
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  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Laboratory Diagnosis of Porphyria.Diagnostics (Basel, Switzerland) · 2021
    Review
  14. Dosage Compensation in Females with X-Linked Metabolic Disorders.International journal of molecular sciences · 2021
    Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Porphyria: What Is It and Who Should Be Evaluated?Rambam Maimonides medical journal · 2018
    Article
  20. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

V BrancaleoniFondazione IRCCS "Cà-Granda" Ospedale Maggiore Policlinico, U.O. di Medicina Interna, Milano, Italy.
M BalwaniDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
F GranataFondazione IRCCS "Cà-Granda" Ospedale Maggiore Policlinico, U.O. di Medicina Interna, Milano, Italy.
G GraziadeiFondazione IRCCS "Cà-Granda" Ospedale Maggiore Policlinico, U.O. di Medicina Interna, Milano, Italy.
P MissineoDipartimento di Scienze Cliniche e di Comunità, Università degli Studi di Milano, Milano, Italy.
V FiorentinoFondazione IRCCS "Cà-Granda" Ospedale Maggiore Policlinico, U.O. di Medicina Interna, Milano, Italy.
S FustinoniDipartimento di Scienze Cliniche e di Comunità, Università degli Studi di Milano, Milano, Italy.
M D CappelliniFondazione IRCCS "Cà-Granda" Ospedale Maggiore Policlinico, U.O. di Medicina Interna, Milano, Italy.
H NaikDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
R J DesnickDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
E Di PierroFondazione IRCCS "Cà-Granda" Ospedale Maggiore Policlinico, U.O. di Medicina Interna, Milano, Italy.
Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico · ITIcahn School of Medicine at Mount Sinai · USUniversity of Milan · IT

Funding

Porphyrias Consortium: SupplementU54DK083909 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BALWANI, MANISHA, DESNICK, ROBERT J · 2009 to 2023
$18.5M
Clinical and Molecular Studies of the Erythropoietic Protoporphyria PhenotypeK23DK095946 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BALWANI, MANISHA · 2013 to 2017
$906k
NIDDK NIH HHS K23 DK095946NIDDK NIH HHS K23 DK095946-02NIDDK NIH HHS U54 DK083909
6 · The paper itself

Abstract

X-linked protoporphyria (XLP), a rare erythropoietic porphyria, results from terminal exon gain-of-function mutations in the ALAS2 gene causing increased ALAS2 activity and markedly increased erythrocyte protoporphyrin levels. Patients present with severe cutaneous photosensitivity and may develop liver dysfunction. XLP was originally reported as X-linked dominant with 100% penetrance in males and females. We characterized 11 heterozygous females from six unrelated XLP families and show markedly varying phenotypic and biochemical heterogeneity, reflecting the degree of X-chromosomal inactivation of the mutant gene. ALAS2 sequencing identified the specific mutation and confirmed heterozygosity among the females. Clinical history, plasma and erythrocyte protoporphyrin levels were determined. Methylation assays of the androgen receptor and zinc-finger MYM type 3 short tandem repeat polymorphisms estimated each heterozygotes X-chromosomal inactivation pattern. Heterozygotes with equal or increased skewing, favoring expression of the wild-type allele had no clinical symptoms and only slightly increased erythrocyte protoporphyrin concentrations and/or frequency of protoporphyrin-containing peripheral blood fluorocytes. When the wild-type allele was preferentially inactivated, heterozygous females manifested the disease phenotype and had both higher erythrocyte protoporphyrin levels and circulating fluorocytes. These findings confirm that the previous dominant classification of XLP is inappropriate and genetically misleading, as the disorder is more appropriately designated XLP.

Indexed as

Genes, X-LinkedPhenotypeX Chromosome InactivationAllelesErythrocytesFemaleGenetic Diseases, X-LinkedGenotypeHumansMaleMutationNuclear ProteinsPedigreePorphyrinsProtoporphyria, ErythropoieticProtoporphyrinsNuclear ProteinsPorphyrinsprotoporphyrin IXProtoporphyrinsReceptors, AndrogenZMYM3 protein, humanALAS2genotype-phenotypeX-chromosomal inactivationX-linked protoporphyria

Identifiers

PMID25615817
PMCPMC4512933
OpenAlexW1597195256

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.