Evidence map›Paper›PMID 25615694›Full record

ArticlePloS one2015

Catalytic efficiency of chitinase-D on insoluble chitinous substrates was improved by fusing auxiliary domains.

Jogi Madhuprakash, Nour Eddine El Gueddari, Bruno M Moerschbacher, Appa Rao Podile

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jogi MadhuprakashDepartment of Plant Sciences, School of Life Sciences, University of Hyderabad, Gachibowli, Hyderabad, India.
Nour Eddine El GueddariDepartment of Plant Biology and Biotechnology, Westphalian Wilhelm's-University of Münster, Münster, Germany.
Bruno M MoerschbacherDepartment of Plant Biology and Biotechnology, Westphalian Wilhelm's-University of Münster, Münster, Germany.
Appa Rao PodileDepartment of Plant Sciences, School of Life Sciences, University of Hyderabad, Gachibowli, Hyderabad, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chitin is an abundant renewable polysaccharide, next only to cellulose. Chitinases are important for effective utilization of this biopolymer. Chitinase D from Serratia proteamaculans (SpChiD) is a single domain chitinase with both hydrolytic and transglycosylation (TG) activities. SpChiD had less of hydrolytic activity on insoluble polymeric chitin substrates due to the absence of auxiliary binding domains. We improved catalytic efficiency of SpChiD in degradation of insoluble chitin substrates by fusing with auxiliary domains like polycystic kidney disease (PKD) domain and chitin binding protein 21 (CBP21). Of the six different SpChiD fusion chimeras, two C-terminal fusions viz. ChiD+PKD and ChiD+CBP resulted in improved hydrolytic activity on α- and β-chitin, respectively. Time-course degradation of colloidal chitin also confirmed that these two C-terminal SpChiD fusion chimeras were more active than other chimeras. More TG products were produced for a longer duration by the fusion chimeras ChiD+PKD and PKD+ChiD+CBP.

Indexed as

Bacterial ProteinsBiocatalysisChitinChitinasesProtein Structure, TertiaryRecombinant Fusion ProteinsSerratiaSubstrate SpecificityBacterial ProteinsChitinChitinasesRecombinant Fusion Proteins

Identifiers

PMID25615694
PMCPMC4304778

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.