Evidence map›Paper›PMID 25615614›Full record

ArticlePloS one2015

Differential requirement for irf8 in formation of embryonic and adult macrophages in zebrafish.

Celia E Shiau, Zoe Kaufman, Ana M Meireles, William S Talbot

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 171 citations in OpenAlex.

  1. Article
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  15. Macrophage vacuolar ATPase (v-ATPase) function controlsbioRxiv : the preprint server for biology · 2025
    Article
  16. Article
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  18. Article
  19. ThemBio · 2025
    Article
  20. Article

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Celia E ShiauDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, California, United States of America.
Zoe KaufmanDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, California, United States of America.
Ana M MeirelesDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, California, United States of America.
William S TalbotDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, California, United States of America.
Stanford University · US

Funding

Genetic Control of Microglia and Neural MacrophagesR01NS065787 · NINDS · STANFORD UNIVERSITY · PI TALBOT, WILLIAM S · 2009 to 2013
$1.7M
Genetic mechanisms regulating inflammation and neutrophil activity in zebrafishR56HL125040 · NHLBI · STANFORD UNIVERSITY · PI TALBOT, WILLIAM S · 2014 to 2014
$361k
Genetic dissection of the role of macrophages in axonal myelination in zebrafishF32NS067754 · NINDS · STANFORD UNIVERSITY · PI SHIAU, CELIA E · 2010 to 2012
$153k
NHLBI NIH HHS R56 HL125040NINDS NIH HHS 5F32NS067754NINDS NIH HHS F32 NS067754NINDS NIH HHS R01 NS065787
6 · The paper itself

Abstract

Interferon regulatory factor 8 (Irf8) is critical for mammalian macrophage development and innate immunity, but its role in teleost myelopoiesis remains incompletely understood. In particular, genetic tools to analyze the role of Irf8 in zebrafish macrophage development at larval and adult stages are lacking. We generated irf8 null mutants in zebrafish using TALEN-mediated targeting. Our analysis defines different requirements for irf8 at different stages. irf8 is required for formation of all macrophages during primitive and transient definitive hematopoiesis, but not during adult-phase definitive hematopoiesis starting at 5-6 days postfertilization. At early stages, irf8 mutants have excess neutrophils and excess cell death in pu.1-expressing myeloid cells. Macrophage fates were recovered in irf8 mutants after wildtype irf8 expression in neutrophil and macrophage lineages, suggesting that irf8 regulates macrophage specification and survival. In juvenile irf8 mutant fish, mature macrophages are present, but at numbers significantly reduced compared to wildtype, indicating an ongoing requirement for irf8 after embryogenesis. As development progresses, tissue macrophages become apparent in zebrafish irf8 mutants, with the possible exception of microglia. Our study defines distinct requirement for irf8 in myelopoiesis before and after transition to the adult hematopoietic system.

Indexed as

AnimalsCells, CulturedGene Expression Regulation, DevelopmentalInterferon Regulatory Factor-8Interferon Regulatory FactorsMacrophagesMicrogliaMutationMyelopoiesisZebrafishZebrafish ProteinsInterferon Regulatory Factor-8Interferon Regulatory FactorsZebrafish Proteins

Identifiers

PMID25615614
PMCPMC4304715
OpenAlexW1999353776

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.