Evidence map›Paper›PMID 25614629›Full record

ArticleThe Journal of biological chemistry2015

Dynamic regulation of Schwann cell enhancers after peripheral nerve injury.

Holly A Hung, Guannan Sun, Sunduz Keles, John Svaren

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 123 citations in OpenAlex.

  1. Article
  2. Sonic Hedgehog Agonists Induce Repair Schwann Cells.Biotechnology and bioengineering · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
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  10. Article
  11. TFEB/3 Govern Repair Schwann Cell Generation and Function Following Peripheral Nerve Injury.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Sustainable Release Selenium Laden with SiOInternational journal of nanomedicine · 2024
    Article
  16. Article
  17. Regulation of chromatin organization during animal regeneration.Cell regeneration (London, England) · 2023
    Review
  18. Article
  19. Review
  20. Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Holly A HungFrom the Waisman Center, Cellular and Molecular Pathology Graduate Program, and.
Guannan SunDepartments of Biostatistics and Medical Informatics and.
Sunduz KelesDepartments of Biostatistics and Medical Informatics and.
John SvarenFrom the Waisman Center, Comparative Biosciences, University of Wisconsin-Madison, Madison, Wisconsin 53705 jpsvaren@wisc.edu.
University of Wisconsin–Madison · US

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI DAVIDSON, RICHARD J · 1985 to 2015
$25.2M
Statistical Methods for the Analysis of ChlP-chip DataR01HG003747 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI KELES, SUNDUZ · 2007 to 2024
$4.8M
Graduate Training In Cellular And Molecular Pathogenesis Of Human DiseasesT32GM081061 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FABRY, ZSUZSANNA · 2010 to 2019
$1.8M
Epigenetic Regulation of Peripheral Nerve MyelinationR01NS075269 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI SVAREN, JOHN P · 2011 to 2015
$1.5M
NHGRI NIH HHS R01 HG003747NICHD NIH HHS HD03352NICHD NIH HHS P30 HD003352NIGMS NIH HHS T32 GM081061NINDS NIH HHS NS075269NINDS NIH HHS R01 NS075269
6 · The paper itself

Abstract

Myelination of the peripheral nervous system is required for axonal function and long term stability. After peripheral nerve injury, Schwann cells transition from axon myelination to a demyelinated state that supports neuronal survival and ultimately remyelination of axons. Reprogramming of gene expression patterns during development and injury responses is shaped by the actions of distal regulatory elements that integrate the actions of multiple transcription factors. We used ChIP-seq to measure changes in histone H3K27 acetylation, a mark of active enhancers, to identify enhancers in myelinating rat peripheral nerve and their dynamics after demyelinating nerve injury. Analysis of injury-induced enhancers identified enriched motifs for c-Jun, a transcription factor required for Schwann cells to support nerve regeneration. We identify a c-Jun-bound enhancer in the gene for Runx2, a transcription factor induced after nerve injury, and we show that Runx2 is required for activation of other induced genes. In contrast, enhancers that lose H3K27ac after nerve injury are enriched for binding sites of the Sox10 and early growth response 2 (Egr2/Krox20) transcription factors, which are critical determinants of Schwann cell differentiation. Egr2 expression is lost after nerve injury, and many Egr2-binding sites lose H3K27ac after nerve injury. However, the majority of Egr2-bound enhancers retain H3K27ac, indicating that other transcription factors maintain active enhancer status after nerve injury. The global epigenomic changes in H3K27ac deposition pinpoint dynamic changes in enhancers that mediate the effects of transcription factors that control Schwann cell myelination and peripheral nervous system responses to nerve injury.

Indexed as

AnimalsCells, CulturedCore Binding Factor Alpha 1 SubunitDemyelinating DiseasesEarly Growth Response Protein 2Enhancer Elements, GeneticEpigenesis, GeneticGene Expression RegulationHistonesMaleMiceMyelin SheathPeripheral Nerve InjuriesProto-Oncogene Proteins c-junRatsRats, Sprague-DawleyCore Binding Factor Alpha 1 SubunitEarly Growth Response Protein 2HistonesProto-Oncogene Proteins c-junSOXE Transcription FactorsTranscription FactorsChIP Sequencing (ChIP-seq)Chromatin Immunoprecipitation (ChiP)Glial CellHistone ModificationNeurobiologySchwann Cells

Identifiers

PMID25614629
PMCPMC4358118
OpenAlexW2046770473

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.