Evidence map›Paper›PMID 25614100›Full record

ArticleVeterinary microbiology2015

Resolution of the cellular proteome of the nucleocapsid protein from a highly pathogenic isolate of porcine reproductive and respiratory syndrome virus identifies PARP-1 as a cellular target whose interaction is critical for virus biology.

Long Liu, Zoe Lear, David J Hughes, Weining Wu, En-min Zhou, Adrian Whitehouse, Hongying Chen, Julian A Hiscox

Open access · hybridAbstract read
In one paragraph

Article in Veterinary microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 31 citations in OpenAlex.

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  13. Novel insights on the pulmonary vascular consequences of COVID-19.American journal of physiology. Lung cellular and molecular physiology · 2020
    Review
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  17. DExD/H-Box Helicase 36 SignalingFrontiers in immunology · 2017
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Long LiuCollege of Life Sciences, Northwest A&F University, Yangling, China.
Zoe LearSchool of Molecular and Cellular Biology and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, UK.
David J HughesSchool of Molecular and Cellular Biology and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, UK.
Weining WuDepartment of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK.
En-min ZhouCollege of Veterinary Medicine, Northwest A&F University, Yangling, China.
Adrian WhitehouseSchool of Molecular and Cellular Biology and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, UK.
Hongying ChenCollege of Life Sciences, Northwest A&F University, Yangling, China. Electronic address: chenhy@nwsuaf.edu.cn.
Julian A HiscoxDepartment of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK; College of Veterinary Medicine, Northwest A&F University, Yangling, China; NIHR Health Protection Research Unit in Emerging and Zoonotic Infections, Liverpool, UK. Electronic address: julian.hiscox@liverpool.ac.uk.
Northwest A&F University · CNUniversity of Leeds · GBHealth Protection Research Unit in Emerging and Zoonotic Infections at University of Liverpool · GBInstitute of Structural and Molecular Biology · GBUniversity of Liverpool · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Porcine reproductive and respiratory syndrome virus (PRRSV) is a major threat to the swine industry and food security worldwide. The nucleocapsid (N) protein is a major structural protein of PRRSV. The primary function of this protein is to encapsidate the viral RNA genome, and it is also thought to participate in the modulation of host cell biology and recruitment of cellular factors to facilitate virus infection. In order to the better understand these latter roles the cellular interactome of PRRSV N protein was defined using label free quantitative proteomics. This identified several cellular factors that could interact with the N protein including poly [ADP-ribose] polymerase 1 (PARP-1), a cellular protein, which can add adenosine diphosphate ribose to a protein. Use of the PARP-1 small molecule inhibitor, 3-AB, in PRRSV infected cells demonstrated that PARP-1 was required and acted as an enhancer factor for virus biology. Serial growth of PRRSV in different concentrations of 3-AB did not yield viruses that were able to grow with wild type kinetics, suggesting that by targeting a cellular protein crucial for virus biology, resistant phenotypes did not emerge. This study provides further evidence that cellular proteins, which are critical for virus biology, can also be targeted to ablate virus growth and provide a high barrier for the emergence of drug resistance.

Indexed as

AnimalsGene Expression RegulationNucleocapsid ProteinsPoly(ADP-ribose) PolymerasesPorcine respiratory and reproductive syndrome virusProtein BindingProteomeProteomicsSwineVirulenceNucleocapsid ProteinsPoly(ADP-ribose) PolymerasesProteome3-ABAntivirusNucleocapsidPARP-1ProteomePRRSV

Identifiers

PMID25614100
PMCPMC4414928
OpenAlexW1977451299

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.