Evidence map›Paper›PMID 25611383›Full record

ArticleCell death & disease2015

NF-κB-dependent and -independent epigenetic modulation using the novel anti-cancer agent DMAPT.

H Nakshatri, H N Appaiah, M Anjanappa, D Gilley, H Tanaka, S Badve, P A Crooks, W Mathews, C Sweeney, P Bhat-Nakshatri

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. NF-κB in inflammation and cancer.Cellular & molecular immunology · 2025
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Discovery of an effective anti-inflammatory agent for inhibiting the activation of NF-κB.Journal of enzyme inhibition and medicinal chemistry · 2023
    Article
  10. Review
  11. Review
  12. Review
  13. Revisiting Epithelial Carcinogenesis.International journal of molecular sciences · 2022
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

H Nakshatri1] Department of Surgery, Indiana University School of Medicine, Indianapolis, IN, USA [2] Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN, USA.
H N AppaiahDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN, USA.
M AnjanappaDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN, USA.
D GilleyDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA.
H TanakaDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA.
S BadveDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN, USA.
P A CrooksDepartment of Pharmaceutical Sciences, University of Arkansas, Little Rock, AR, USA.
W MathewsLeuchemix, Inc., Woodside, CA, USA.
C SweeneyLank Center for Genitourinary Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
P Bhat-NakshatriDepartment of Surgery, Indiana University School of Medicine, Indianapolis, IN, USA.
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · USDana-Farber Cancer Institute · USUniversity of Arkansas at Little Rock · US

Funding

Novel melampomagnolide B-based prodrugs for the treatment of leukemiaR01CA158275 · NCI · UNIV OF ARKANSAS FOR MED SCIS · PI CROOKS, PETER ANTHONY · 2011 to 2015
$1.6M
Chemoprevention of tobacco carcinogen-induced bladder cancerR03CA143994 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI NAKSHATRI, HARIKRISHNA · 2010 to 2011
$152k
NCI NIH HHS CA143994-01A1NCI NIH HHS R01 CA158275NCI NIH HHS R03 CA143994
6 · The paper itself

Abstract

The transcription factor nuclear factor-kappaB (NF-κB) is constitutively active in several cancers and is a target of therapeutic development. We recently developed dimethylaminoparthenolide (DMAPT), a clinical grade water-soluble analog of parthenolide, as a potent inhibitor of NF-κB and demonstrated in vitro and in vivo anti-tumor activities in multiple cancers. In this study, we show DMAPT is an epigenetic modulator functioning in an NF-κB-dependent and -independent manner. DMAPT-mediated NF-κB inhibition resulted in elevated histone H3K36 trimethylation (H3K36me3), which could be recapitulated through genetic ablation of the p65 subunit of NF-κB or inhibitor-of-kappaB alpha super-repressor overexpression. DMAPT treatment and p65 ablation increased the levels of H3K36 trimethylases NSD1 (KMT3B) and SETD2 (KMT3A), suggesting that NF-κB directly represses their expression and that lower H3K36me3 is an epigenetic marker of constitutive NF-κB activity. Overexpression of a constitutively active p65 subunit of NF-κB reduced NSD1 and H3K36me3 levels. NSD1 is essential for DMAPT-induced expression of pro-apoptotic BIM, indicating a functional link between epigenetic modification and gene expression. Interestingly, we observed enhanced H4K20 trimethylation and induction of H4K20 trimethylase KMT5C in DMAPT-treated cells independent of NF-κB inhibition. These results add KMT5C to the list NF-κB-independent epigenetic targets of parthenolide, which include previously described histone deacetylase 1 (HDAC-1) and DNA methyltransferase 1. As NSD1 and SETD2 are known tumor suppressors and loss of H4K20 trimethylation is an early event in cancer progression, which contributes to genomic instability, we propose DMAPT as a potent pharmacologic agent that can reverse NF-κB-dependent and -independent cancer-specific epigenetic abnormalities.

Indexed as

AnimalsApoptosis Regulatory ProteinsBcl-2-Like Protein 11Biomarkers, TumorBreast NeoplasmsCell Line, TumorEpigenesis, GeneticFemaleGene Expression Regulation, NeoplasticGenome, HumanHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesHumansI-kappa B ProteinsIntracellular Signaling Peptides and ProteinsApoptosis Regulatory ProteinsBCL2L11 protein, humanBcl2l11 protein, mouseBcl-2-Like Protein 11Biomarkers, TumorHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesI-kappa B ProteinsIntracellular Signaling Peptides and ProteinsLC-1 compoundLysineMembrane ProteinsNF-kappa BNF-KappaB Inhibitor alphaNFKBIA protein, humanNfkbia protein, mouseNSD1 protein, humanNuclear ProteinsProto-Oncogene ProteinsSesquiterpenesSETD2 protein, humanTranscription Factor RelA

Identifiers

PMID25611383
PMCPMC4669767
OpenAlexW1965892556

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.