Evidence map›Paper›PMID 25609789›Full record

ArticleThe EMBO journal2015

Wnt activity and basal niche position sensitize intestinal stem and progenitor cells to DNA damage.

Si Tao, Duozhuang Tang, Yohei Morita, Tobias Sperka, Omid Omrani, André Lechel, Vadim Sakk, Johann Kraus, Hans A Kestler, Michael Kühl and 1 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Wnt Signaling and Aging of the Gastrointestinal Tract.International journal of molecular sciences · 2022
    Review
  11. Article
  12. Limitations to Understanding Intestinal Stem Cell Activity via Cre-Lox-Based Lineage Tracing.Cellular and molecular gastroenterology and hepatology · 2022
    Article
  13. Review
  14. Balancing DNA repair to prevent ageing and cancer.Experimental cell research · 2021
    Review
  15. A Review of the Impact of Calorie Restriction on Stem Cell Potency.The Malaysian journal of medical sciences : MJMS · 2021
    Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Heat KilledJournal of oncology · 2021
    Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Si TaoLeibniz Institute for Age Research - Fritz Lipmann Institute e.V. (FLI), Jena, Germany Institute of Biochemistry and Molecular Biology, Ulm University, Ulm, Germany International Graduate School in Molecular Medicine Ulm, Ulm University, Ulm, Germany.
Duozhuang TangLeibniz Institute for Age Research - Fritz Lipmann Institute e.V. (FLI), Jena, Germany.
Yohei MoritaLeibniz Institute for Age Research - Fritz Lipmann Institute e.V. (FLI), Jena, Germany.
Tobias SperkaLeibniz Institute for Age Research - Fritz Lipmann Institute e.V. (FLI), Jena, Germany.
Omid OmraniLeibniz Institute for Age Research - Fritz Lipmann Institute e.V. (FLI), Jena, Germany.
André LechelCooperation Group between the Leibniz Institute for Age Research, Ulm University, Ulm, Germany.
Vadim SakkCooperation Group between the Leibniz Institute for Age Research, Ulm University, Ulm, Germany.
Johann KrausMedical Systems Biology Unit, Ulm University, Ulm, Germany.
Hans A KestlerLeibniz Institute for Age Research - Fritz Lipmann Institute e.V. (FLI), Jena, Germany Medical Systems Biology Unit, Ulm University, Ulm, Germany.
Michael KühlInstitute of Biochemistry and Molecular Biology, Ulm University, Ulm, Germany michael.kuehl@uni-ulm.de klrudolph@fli-leibniz.de.
Karl Lenhard RudolphLeibniz Institute for Age Research - Fritz Lipmann Institute e.V. (FLI), Jena, Germany Research Group on Stem Cell Aging, Jena University Hospital (UKJ), Jena, Germany michael.kuehl@uni-ulm.de klrudolph@fli-leibniz.de.
Leibniz Institute on Aging - Fritz Lipmann Institute (FLI) · DEUniversität Ulm · DEJena University Hospital · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aging and carcinogenesis coincide with the accumulation of DNA damage and mutations in stem and progenitor cells. Molecular mechanisms that influence responses of stem and progenitor cells to DNA damage remain to be delineated. Here, we show that niche positioning and Wnt signaling activity modulate the sensitivity of intestinal stem and progenitor cells (ISPCs) to DNA damage. ISPCs at the crypt bottom with high Wnt/β-catenin activity are more sensitive to DNA damage compared to ISPCs in position 4 with low Wnt activity. These differences are not induced by differences in cell cycle activity but relate to DNA damage-dependent activation of Wnt signaling, which in turn amplifies DNA damage checkpoint activation. The study shows that instructed enhancement of Wnt signaling increases radio-sensitivity of ISPCs, while inhibition of Wnt signaling decreases it. These results provide a proof of concept that cell intrinsic levels of Wnt signaling modulate the sensitivity of ISPCs to DNA damage and heterogeneity in Wnt activation in the stem cell niche contributes to the selection of ISPCs in the context of DNA damage.

Indexed as

AnimalsBlotting, WesternDNA DamageFlow CytometryFluorescent Antibody TechniqueIn Situ HybridizationIn Situ Nick-End LabelingIntestinesMiceMice, Inbred C57BLMice, KnockoutMicroarray AnalysisRadiation ToleranceReal-Time Polymerase Chain ReactionStatistics, NonparametricStem CellsDNA damageintestinal progenitor cellsintestinal stem cellstelomeresWnt

Identifiers

PMID25609789
PMCPMC4365032
OpenAlexW1987582055

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.