Evidence map›Paper›PMID 25609671›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Antibody repertoire diversification through VH gene replacement in mice cloned from an IgA plasma cell.

Rashmi Kumar, Martina P Bach, Federica Mainoldi, Mikako Maruya, Satoshi Kishigami, Hassan Jumaa, Teruhiko Wakayama, Osami Kanagawa, Sidonia Fagarasan, Stefano Casola

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. The immune evasion roles ofFrontiers in cellular and infection microbiology · 2023
    Review
  3. Review
  4. Article
  5. Review
  6. IgH isotype-specific B cell receptor expression influences B cell fate.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  7. Heavy-chain receptor editing unbound.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  8. VH replacement in primary immunoglobulin repertoire diversification.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Rashmi KumarThe Institute of Molecular Oncology (IFOM) of the Italian Foundation for Cancer Research (FIRC), Milan 20139, Italy;
Martina P BachInstitute of Immunology, University Clinic Ulm, 89081 Ulm, Germany; Department of Molecular Immunology, Albert-Ludwigs University of Freiburg and Max Planck Institute of Immunobiology and Epigenetics, 79108 Freiburg, Germany;
Federica MainoldiThe Institute of Molecular Oncology (IFOM) of the Italian Foundation for Cancer Research (FIRC), Milan 20139, Italy;
Mikako MaruyaCenter for Integrative Medical Sciences, RIKEN Yokohama Institute, Yokohama, Kanagawa 230-0045, Japan;
Satoshi KishigamiRIKEN Center for Developmental Biology, Kobe, Hyogo 650-0047, Japan; and.
Hassan JumaaInstitute of Immunology, University Clinic Ulm, 89081 Ulm, Germany; Department of Molecular Immunology, Albert-Ludwigs University of Freiburg and Max Planck Institute of Immunobiology and Epigenetics, 79108 Freiburg, Germany;
Teruhiko WakayamaRIKEN Center for Developmental Biology, Kobe, Hyogo 650-0047, Japan; and.
Osami KanagawaAkashi City Hospital, Akashi 673-8501, Japan.
Sidonia FagarasanCenter for Integrative Medical Sciences, RIKEN Yokohama Institute, Yokohama, Kanagawa 230-0045, Japan;
Stefano CasolaThe Institute of Molecular Oncology (IFOM) of the Italian Foundation for Cancer Research (FIRC), Milan 20139, Italy; stefano.casola@ifom.eu.
FIRC Institute of Molecular Oncology · ITMax Planck Institute of Immunobiology and Epigenetics · DERIKEN Center for Computational Science · JPRIKEN Center for Integrative Medical Sciences · JPAkashi Municipal City Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mammals, VDJ recombination is responsible for the establishment of a highly diversified preimmune antibody repertoire. Acquisition of a functional Ig heavy (H) chain variable (V) gene rearrangement is thought to prevent further recombination at the IgH locus. Here, we describe VHQ52(NT); Vκgr32(NT) Ig monoclonal mice reprogrammed from the nucleus of an intestinal IgA(+) plasma cell. In VHQ52(NT) mice, IgA replaced IgM to drive early B-cell development and peripheral B-cell maturation. In VHQ52(NT) animals, over 20% of mature B cells disrupted the single productive, nonautoimmune IgH rearrangement through VH replacement and exchanged it with a highly diversified pool of IgH specificities. VH replacement occurred in early pro-B cells, was independent of pre-B-cell receptor signaling, and involved predominantly one adjacent VH germ-line gene. VH replacement was also identified in 5% of peripheral B cells of mice inheriting a different productive VH rearrangement expressed in the form of an IgM H chain. In summary, editing of a productive IgH rearrangement through VH replacement can account for up to 20% of the IgH repertoire expressed by mature B cells.

Indexed as

Cloning, OrganismAnimalsBase SequenceImmunoglobulin AImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionMiceMolecular Sequence DataSequence Homology, Nucleic AcidSignal TransductionImmunoglobulin AImmunoglobulin Heavy ChainsImmunoglobulin Variable Regionantibody repertoireB cellsIgAnuclear cloningVH replacement

Identifiers

PMID25609671
PMCPMC4321288
OpenAlexW2048180523

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.