Evidence map›Paper›PMID 25609551›Full record

ArticleGenome biology2014

Genomes of the rice pest brown planthopper and its endosymbionts reveal complex complementary contributions for host adaptation.

Jian Xue, Xin Zhou, Chuan-Xi Zhang, Li-Li Yu, Hai-Wei Fan, Zhuo Wang, Hai-Jun Xu, Yu Xi, Zeng-Rong Zhu, Wen-Wu Zhou and 31 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 191 papers.

0numbers the graph read from it
0cells of the map it votes in
191citing papers in PubMed
38.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

191 citing papers in PubMed, 451 citations in OpenAlex.

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  14. Reduction in Gonad Development and Sperm Motility in Male Brown PlanthopperInternational journal of molecular sciences · 2025
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  20. A complete DNA repair system assembled by two endosymbionts restores heat tolerance of the insect host.Proceedings of the National Academy of Sciences of the United States of America · 2024
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131 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 8 institutions in 7 countries.

Jian Xue
Xin Zhou
Chuan-Xi Zhang
Li-Li Yu
Hai-Wei Fan
Zhuo Wang
Hai-Jun Xu
Yu Xi
Zeng-Rong Zhu
Wen-Wu Zhou
Peng-Lu Pan
Bao-Ling Li
John K Colbourne
Hiroaki Noda
Yoshitaka Suetsugu
Tetsuya Kobayashi
Yuan Zheng
Shanlin Liu
Rui Zhang
Yang Liu
Ya-Dan Luo
Dong-Ming Fang
Yan Chen
Dong-Liang Zhan
Xiao-Dan Lv
Yue Cai
Zhao-Bao Wang
Hai-Jian Huang
Ruo-Lin Cheng
Xue-Chao Zhang
Yi-Han Lou
Bing Yu
Ji-Chong Zhuo
Yu-Xuan Ye
Wen-Qing Zhang
Zhi-Cheng Shen
Huan-Ming Yang
Jian Wang
Jun Wang
Yan-Yuan Bao
Jia-An Cheng
BGI Group (China) · CNChina National Rice Research Institute · CNState Key Laboratory of Rice BiologyZhejiang University · CNInstitute of Agrobiological Sciences · JPSun Yat-sen University · CNUniversity of Birmingham · GBUniversity of Hong Kong · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe brown planthopper, Nilaparvata lugens, the most destructive pest of rice, is a typical monophagous herbivore that feeds exclusively on rice sap, which migrates over long distances. Outbreaks of it have re-occurred approximately every three years in Asia. It has also been used as a model system for ecological studies and for developing effective pest management. To better understand how a monophagous sap-sucking arthropod herbivore has adapted to its exclusive host selection and to provide insights to improve pest control, we analyzed the genomes of the brown planthopper and its two endosymbionts.

resultsWe describe the 1.14 gigabase planthopper draft genome and the genomes of two microbial endosymbionts that permit the planthopper to forage exclusively on rice fields. Only 40.8% of the 27,571 identified Nilaparvata protein coding genes have detectable shared homology with the proteomes of the other 14 arthropods included in this study, reflecting large-scale gene losses including in evolutionarily conserved gene families and biochemical pathways. These unique genomic features are functionally associated with the animal's exclusive plant host selection. Genes missing from the insect in conserved biochemical pathways that are essential for its survival on the nutritionally imbalanced sap diet are present in the genomes of its microbial endosymbionts, which have evolved to complement the mutualistic nutritional needs of the host.

conclusionsOur study reveals a series of complex adaptations of the brown planthopper involving a variety of biological processes, that result in its highly destructive impact on the exclusive host rice. All these findings highlight potential directions for effective pest control of the planthopper.

Indexed as

Genome, InsectHerbivoryAdaptation, BiologicalAnimalsArthropodsAsiaBacteriaEvolution, MolecularGenomicsHemipteraHost SpecificityMolecular Sequence DataMultigene FamilyOryzaPhylogenySequence Homology, Nucleic Acid

Identifiers

PMID25609551
PMCPMC4269174
OpenAlexW2170438129

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.