Evidence map›Paper›PMID 25608028›Full record

ArticleThe journal of physical chemistry. B2015

Cysteine-specific Cu2+ chelating tags used as paramagnetic probes in double electron electron resonance.

Timothy F Cunningham, Matthew D Shannon, Miriam R Putterman, Rajith J Arachchige, Ishita Sengupta, Min Gao, Christopher P Jaroniec, Sunil Saxena

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
11.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Article
  3. A newJournal of magnetic resonance (San Diego, Calif. : 1997) · 2023
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Rotameric preferences of a protein spin label at edge-strand β-sheet sites.Protein science : a publication of the Protein Society · 2016
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Timothy F CunninghamDepartment of Chemistry, University of Pittsburgh , 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States.
Matthew D Shannon
Miriam R Putterman
Rajith J Arachchige
Ishita Sengupta
Min Gao
Christopher P Jaroniec
Sunil Saxena
The Ohio State University · USUniversity of Pittsburgh · US

Funding

Acquisition of a High Frequency Pulsed Electron Spin Resonance SpectrometerS10RR028701 · NCRR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SAXENA, SUNIL K · 2011 to 2011
$1.6M
NCRR NIH HHS 1S10RR028701NCRR NIH HHS S10 RR028701
6 · The paper itself

Abstract

Double electron electron resonance (DEER) is an attractive technique that is utilized for gaining insight into protein structure and dynamics via nanometer-scale distance measurements. The most commonly used paramagnetic tag in these measurements is a nitroxide spin label, R1. Here, we present the application of two types of high-affinity Cu(2+) chelating tags, based on the EDTA and cyclen metal-binding motifs as alternative X-band DEER probes, using the B1 immunoglobulin-binding domain of protein G (GB1) as a model system. Both types of tags have been incorporated into a variety of protein secondary structure environments and exhibit high spectral sensitivity. In particular, the cyclen-based tag displays distance distributions with comparable distribution widths and most probable distances within 1-3 Å when compared to homologous R1 distributions. The results display the viability of the cyclen tag as an alternative to the R1 side chain for X-band DEER distance measurements in proteins.

Indexed as

CationsChelating AgentsCopperCysteineCyclamsEdetic AcidHeterocyclic CompoundsMagnetic Resonance SpectroscopyProteinsProtein Structure, SecondarySpin LabelsCationsChelating AgentsCopperCyclamscyclenCysteineEdetic AcidHeterocyclic CompoundsProteinsSpin Labels

Identifiers

PMID25608028
PMCPMC4349203
OpenAlexW2325979074

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.