Evidence map›Paper›PMID 25606451›Full record

ArticleMeta gene2014

At the southeast fringe of the Bantu expansion: genetic diversity and phylogenetic relationships to other sub-Saharan tribes.

Diane Rowold, Ralph Garcia-Bertrand, Silvia Calderon, Luis Rivera, David Perez Benedico, Miguel A Alfonso Sanchez, Shilpa Chennakrishnaiah, Mangela Varela, Rene J Herrera

Open access · hybridAbstract read
In one paragraph

Article in Meta gene, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Diane RowoldFoundation for Applied Molecular Evolution, Gainesville, FL 32601, USA.
Ralph Garcia-BertrandBiology Department, Colorado College, Colorado Springs, CO 80903, USA.
Silvia CalderonCollege of Dentistry, New York University, New York, NY 10010, USA.
Luis RiveraCollege of Health Sciences, Florida International University, Miami, FL 33199, USA.
David Perez BenedicoDepartment of Biology, Miami Dade College, Miami, FL 33199, USA.
Miguel A Alfonso SanchezDepartamento de Genética y Antropología Fısica, Facultad de Ciencia y Tecnología, Universidad del País Vasco, 48080 Bilbao, Bizkaia, Spain.
Shilpa ChennakrishnaiahDepartment of Human Genetics, McGill University, Montreal, Quebec H3Z 2Z3, Canada.
Mangela VarelaBiology Department, Colorado College, Colorado Springs, CO 80903, USA.
Rene J HerreraBiology Department, Colorado College, Colorado Springs, CO 80903, USA.
Colorado College · USFlorida International University · USFoundation for Applied Molecular Evolution · USMcGill University · CAMiami Dade College · USNew York University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here, we present 12 loci paternal haplotypes (Y-STR profiles) against the backdrop of the Y-SNP marker system of Bantu males from the Maputo Province of Southeast Africa, a region believed to represent the southeastern fringe of the Bantu expansion. Our Maputo Bantu group was analyzed within the context of 27 geographically relevant reference populations in order to ascertain its genetic relationship to other Bantu and non Bantu (Pygmy, Khoisan and Nilotic) sub-equatorial tribes from West and East Africa. This study entails statistical pair wise comparisons and multidimensional scaling based on YSTR Rst distances, network analyses of Bantu (B2a-M150) and Pygmy (B2b-M112) lineages as well as an assessment of Y-SNP distribution patterns. Several notable findings include the following: 1) the Maputo Province Bantu exhibits a relatively close paternal affinity with both east and west Bantu tribes due to high proportion of Bantu Y chromosomal markers, 2) only traces of Khoisan (1.3%) and Pygmy (1.3%) markers persist in the Maputo Province Bantu gene pool, 3) the occurrence of R1a1a-M17/M198, a member of the Eurasian R1a-M420 branch in the population of the Maputo Province, may represent back migration events and/or recent admixture events, 4) the shared presence of E1b1b1-M35 in all Tanzanian tribes examined, including Bantu and non-Bantu groups, in conjunction with its nearly complete absence in the West African populations indicate that, in addition to a shared linguistic, cultural and genetic heritage, geography (e.g., east vs. west) may have impacted the paternal landscape of sub-Saharan Africa, 5) the admixture and assimilation processes of Bantu elements were both highly complex and region-specific.

Indexed as

AfricaBantuMAP, Maputo ProvinceMDS, multi-dimensional scalingMJ, medial joiningmtDNA, mitochondrial DNAPCR, polymerase chain reactionPhylogeneticsPopulation geneticsRFLP, restriction fragment length polymorphismSNP, single nucleotide polymorphismSTR, short tandem repeatTMRCA, time of most recent common ancestorY-chromosomeY-STRs

Identifiers

PMID25606451
PMCPMC4287857
OpenAlexW2088395005

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.