Evidence map›Paper›PMID 25606430›Full record

ArticleMeta gene2014

Genetic diversity and relationship of Hedychium from Northeast India as dissected using PCA analysis and hierarchical clustering.

Supriyo Basak, Aadi Moolam Ramesh, Vigya Kesari, Ajay Parida, Sudip Mitra, Latha Rangan

Abstract read
In one paragraph

Article in Meta gene, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Chemical Composition and Biological Activities ofMolecules (Basel, Switzerland) · 2022
    Article
  2. Article
  3. Review
  4. Uncharted Source of Medicinal Products: The Case of theMedicines (Basel, Switzerland) · 2020
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Supriyo BasakDepartment of Biotechnology, Indian Institute of Technology, Guwahati, Assam 781 039, India.
Aadi Moolam RameshDepartment of Biotechnology, Indian Institute of Technology, Guwahati, Assam 781 039, India.
Vigya KesariDepartment of Biotechnology, Indian Institute of Technology, Guwahati, Assam 781 039, India.
Ajay ParidaM S Swaminathan Research Foundation, 3rd Cross Street, Taramani Institutional area, Chennai 600 113, India.
Sudip MitraDepartment of Environmental Science, Tezpur University, Assam 784 028, India.
Latha RanganDepartment of Biotechnology, Indian Institute of Technology, Guwahati, Assam 781 039, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular genetic fingerprints of eleven Hedychium species from Northeast India were developed using PCR based markers. Fifteen inter-simple sequence repeats (ISSRs) and five amplified fragment length polymorphism (AFLP) primers produced 547 polymorphic fragments. Positive correlation (r = 0.46) was observed between the mean genetic similarity and genetic diversity parameters at the inter-species level. AFLP and ISSR markers were able to group the species according to its altitude and intensity of flower aroma. Cophenetic correlation coefficients between the dendrogram and the original similarity matrix were significant for ISSR (r = 0.89) compared to AFLP (r = 0.83) markers. This genetic characterization of Hedychium from Northeast India contributes to the knowledge of genetic structure of the species and can be used to define strategies for their conservation and management.

Indexed as

AFLPAFLP, amplified fragment length polymorphismDNA, deoxyribonucleic AcidGenetic diversityGUBH, Gauhati university botanical herbariumHCA, hierarchical clusteringHedychiumISSR, inter- simple sequence repeatMI, marker indexNE, North eastNortheast IndiaNTSYS, numerical taxonomy systemPCAPCA, principal component analysisPCR, polymerase chain reactionPIC, polymorphic information contentUPGMA, unweighted pair-group arithmetic average.

Identifiers

PMID25606430
PMCPMC4287868

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.