ArticleMeta gene2014
Metagenomic analysis of buffalo rumen microbiome: Effect of roughage diet on Dormancy and Sporulation genes.
Article in Meta gene, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed, 30 citations in OpenAlex.
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- Potential of dietary hemp and cannabinoids to modulate immune response to enhance health and performance in animals: opportunities and challenges.Frontiers in immunology · 2023Review
- Diversity and functional analysis of rumen and fecal microbial communities associated with dietary changes in crossbreed dairy cattle.PloS one · 2023Article
- Prevotella: A Key Player in Ruminal Metabolism.Microorganisms · 2022Review
- Metagenomic landscape of taxonomy, metabolic potential and resistome of Sardinella longiceps gut microbiome.Archives of microbiology · 2021Article
- Accessing Dietary Effects on the Rumen Microbiome: Different Sequencing Methods Tell Different Stories.Veterinary sciences · 2021Article
- Lower methane emissions were associated with higher abundance of ruminal Prevotella in a cohort of Colombian buffalos.BMC microbiology · 2020Article
- The Planktonic Core Microbiome and Core Functions in the Cattle Rumen by Next Generation Sequencing.Frontiers in microbiology · 2018Article
- Metagenomic insights into the rumen microbial fibrolytic enzymes in Indian crossbred cattle fed finger millet straw.AMB Express · 2017Article
- New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11.The ISME journal · 2017Article
- Studies on bacterial community composition are affected by the time and storage method of the rumen content.PloS one · 2017Article
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Authors and funding
9 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Buffalo rumen microbiome experiences a variety of diet stress and represents reservoir of Dormancy and Sporulation genes. However, the information on genomic responses to such conditions is very limited. The Ion Torrent PGM next generation sequencing technology was used to characterize general microbial diversity and the repertoire of microbial genes present, including genes associated with Dormancy and Sporulation in Mehsani buffalo rumen metagenome. The research findings revealed the abundance of bacteria at the domain level and presence of Dormancy and Sporulation genes which were predominantly associated with the Clostridia and Bacilli taxa belonging to the phyla Firmicutes. Genes associated with Sporulation cluster and Sporulation orphans were increased from 50% to 100% roughage treatment, thereby promoting sporulation all along the treatments. The spore germination is observed to be the highest in the 75% roughage treatment both in the liquid and solid rumen fraction samples with respect to the decrease in the values of the genes associated with spore core dehydration, thereby facilitating spore core hydration which is necessary for spore germination.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.