Evidence map›Paper›PMID 25605925›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Force-dependent transition in the T-cell receptor β-subunit allosterically regulates peptide discrimination and pMHC bond lifetime.

Dibyendu Kumar Das, Yinnian Feng, Robert J Mallis, Xiaolong Li, Derin B Keskin, Rebecca E Hussey, Sonia K Brady, Jia-Huai Wang, Gerhard Wagner, Ellis L Reinherz and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 189 papers.

0numbers the graph read from it
0cells of the map it votes in
189citing papers in PubMed
12.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

189 citing papers in PubMed, 256 citations in OpenAlex.

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  14. Atomistic TCR-ligand interactions instruct memory T-cell differentiation.bioRxiv : the preprint server for biology · 2025
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129 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Dibyendu Kumar DasDepartment of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN 37235;
Yinnian FengDepartment of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN 37235;
Robert J MallisDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115;
Xiaolong LiSchool of Life Sciences, University of Science and Technology of China, Hefei 230027, People's Republic of China;
Derin B KeskinDepartment of Medical Oncology, Laboratory of Immunobiology, Dana-Farber Cancer Institute, Boston, MA 02115; Department of Medicine, Harvard Medical School, Boston, MA 02115; and.
Rebecca E HusseyDepartment of Medical Oncology, Laboratory of Immunobiology, Dana-Farber Cancer Institute, Boston, MA 02115;
Sonia K BradyDepartment of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN 37235;
Jia-Huai WangSchool of Life Sciences, University of Science and Technology of China, Hefei 230027, People's Republic of China; Department of Medical Oncology, Laboratory of Immunobiology, Dana-Farber Cancer Institute, Boston, MA 02115;
Gerhard WagnerDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115; matt.lang@vanderbilt.edu ellis_reinherz@dfci.harvard.edu gerhard_wagner@hms.harvard.edu.
Ellis L ReinherzDepartment of Medical Oncology, Laboratory of Immunobiology, Dana-Farber Cancer Institute, Boston, MA 02115; Department of Medicine, Harvard Medical School, Boston, MA 02115; and matt.lang@vanderbilt.edu ellis_reinherz@dfci.harvard.edu gerhard_wagner@hms.harvard.edu.
Matthew J LangDepartment of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN 37235; Department of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, TN 37235 matt.lang@vanderbilt.edu ellis_reinherz@dfci.harvard.edu gerhard_wagner@hms.harvard.edu.
Harvard University · USVanderbilt University · USDana-Farber Cancer Institute · USUniversity of Science and Technology of China · CN

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
T CELL SPECIFIC TRANSCRIPTION COMPLEXESP01GM047467 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAGNER, GERHARD · 1992 to 2017
$28.6M
STRUCTURE BASIS OF IMMUNE-CELL SURFACE RECEPTOR FUNCTIONR01AI037581 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAGNER, GERHARD · 1996 to 2021
$6.7M
Mechanical basis of T cell receptor triggeringR01AI100643 · NIAID · VANDERBILT UNIVERSITY · PI LANG, MATTHEW J. · 2012 to 2015
$1.6M
NCI NIH HHS CA68485NCI NIH HHS P30 CA068485NIAID NIH HHS R01 AI037581NIAID NIH HHS R01 AI100643NIAID NIH HHS R01AI100643NIAID NIH HHS R01AI37581NIDDK NIH HHS DK058404NIDDK NIH HHS P30 DK058404NIGMS NIH HHS P01 GM047467NIGMS NIH HHS P01GM047467
6 · The paper itself

Abstract

The αβ T-cell receptor (TCR) on each T lymphocyte mediates exquisite specificity for a particular foreign peptide bound to a major histocompatibility complex molecule (pMHC) displayed on the surface of altered cells. This recognition stimulates protection in the mammalian host against intracellular pathogens, including viruses, and involves piconewton forces that accompany pMHC ligation. Physical forces are generated by T-lymphocyte movement during immune surveillance as well as by cytoskeletal rearrangements at the immunological synapse following cessation of cell migration. The mechanistic explanation for how TCRs distinguish between foreign and self-peptides bound to a given MHC molecule is unclear: peptide residues themselves comprise few of the TCR contacts on the pMHC, and pathogen-derived peptides are scant among myriad self-peptides bound to the same MHC class arrayed on infected cells. Using optical tweezers and DNA tether spacer technology that permit piconewton force application and nanometer scale precision, we have determined how bioforces relate to self versus nonself discrimination. Single-molecule analyses involving isolated αβ-heterodimers as well as complete TCR complexes on T lymphocytes reveal that the FG loop in the β-subunit constant domain allosterically controls both the variable domain module's catch bond lifetime and peptide discrimination via force-driven conformational transition. In contrast to integrins, the TCR interrogates its ligand via a strong force-loaded state with release through a weakened, extended state. Our work defines a key element of TCR mechanotransduction, explaining why the FG loop structure evolved for adaptive immunity in αβ but not γδTCRs or immunoglobulins.

Indexed as

Major Histocompatibility ComplexAmino Acid SequenceModels, MolecularOptical TweezersPeptidesReceptors, Antigen, T-Cell, alpha-betaSequence Homology, Amino AcidPeptidesReceptors, Antigen, T-Cell, alpha-betacatch bondmechanosensoroptical tweezerspeptide discriminationT-cell receptor

Identifiers

PMID25605925
PMCPMC4321250
OpenAlexW2011584482

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.