Evidence map›Paper›PMID 25605899›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Higd1a is a positive regulator of cytochrome c oxidase.

Takaharu Hayashi, Yoshihiro Asano, Yasunori Shintani, Hiroshi Aoyama, Hidetaka Kioka, Osamu Tsukamoto, Masahide Hikita, Kyoko Shinzawa-Itoh, Kazuaki Takafuji, Shuichiro Higo and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 129 citations in OpenAlex.

  1. Article
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  6. Experience-mediated transcriptional memory correlates with hypoxia resistance in the nervous system of the sea hareAmerican journal of physiology. Regulatory, integrative and comparative physiology · 2025
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  15. Cytochrome c oxidase subunit I gene in Thalassiosira nordenskioeldii strains inhabiting in cold and warm sea waters.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2024
    Article
  16. Article
  17. Review
  18. Mitochondrial Factors in the Cell Nucleus.International journal of molecular sciences · 2023
    Review
  19. Review
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 1 country.

Takaharu HayashiDepartments of Medical Biochemistry and Cardiovascular Medicine.
Yoshihiro AsanoDepartments of Medical Biochemistry and Cardiovascular Medicine, takasima@cardiology.med.osaka-u.ac.jp asano@cardiology.med.osaka-u.ac.jp.
Yasunori ShintaniDepartments of Medical Biochemistry and.
Hiroshi AoyamaGraduate School of Pharmaceutical Science, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan;
Hidetaka KiokaCardiovascular Medicine.
Osamu TsukamotoDepartments of Medical Biochemistry and.
Masahide HikitaDepartment of Life Science, University of Hyogo, 3-2-1 Kouto, Kamigohri, Akoh, Hyogo 678-1297, Japan;
Kyoko Shinzawa-ItohDepartment of Life Science, University of Hyogo, 3-2-1 Kouto, Kamigohri, Akoh, Hyogo 678-1297, Japan;
Kazuaki TakafujiCenter for Research Education, and.
Shuichiro HigoDepartments of Medical Biochemistry and Cardiovascular Medicine.
Hisakazu KatoDepartments of Medical Biochemistry and.
Satoru YamazakiDepartments of Cell Biology and.
Ken MatsuokaCardiovascular Medicine.
Atsushi NakanoClinical Research and Development, National Cerebral and Cardiovascular Center Research Institute, Suita, Osaka 565-8565, Japan;
Hiroshi AsanumaDepartment of Cardiovascular Science and Technology, Kyoto Prefectural University School of Medicine, Kamigyo-ku, Kyoto 602-8566, Japan;
Masanori AsakuraClinical Research and Development, National Cerebral and Cardiovascular Center Research Institute, Suita, Osaka 565-8565, Japan;
Tetsuo MinaminoCardiovascular Medicine.
Yu-ichi GotoDepartment of Child Neurology, National Center Hospital of Neurology and Psychiatry, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8502, Japan; and.
Takashi OguraDepartment of Life Science, University of Hyogo, 3-2-1 Kouto, Kamigohri, Akoh, Hyogo 678-1297, Japan;
Masafumi KitakazeClinical Research and Development, National Cerebral and Cardiovascular Center Research Institute, Suita, Osaka 565-8565, Japan;
Issei KomuroDepartment of Cardiovascular Medicine, Graduate School of Medicine, University of Tokyo, Tokyo 113-8656, Japan.
Yasushi SakataCardiovascular Medicine.
Tomitake TsukiharaDepartment of Life Science, University of Hyogo, 3-2-1 Kouto, Kamigohri, Akoh, Hyogo 678-1297, Japan; Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Kawaguchi, Saitama 332-0012, Japan;
Shinya YoshikawaDepartment of Life Science, University of Hyogo, 3-2-1 Kouto, Kamigohri, Akoh, Hyogo 678-1297, Japan;
Seiji TakashimaDepartments of Medical Biochemistry and Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Kawaguchi, Saitama 332-0012, Japan; takasima@cardiology.med.osaka-u.ac.jp asano@cardiology.med.osaka-u.ac.jp.
University of Hyogo · JPNational Cerebral and Cardiovascular Center · JPJapan Science and Technology Agency · JPKyoto Prefectural University · JPNational Center of Neurology and Psychiatry · JPOsaka University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cytochrome c oxidase (CcO) is the only enzyme that uses oxygen to produce a proton gradient for ATP production during mitochondrial oxidative phosphorylation. Although CcO activity increases in response to hypoxia, the underlying regulatory mechanism remains elusive. By screening for hypoxia-inducible genes in cardiomyocytes, we identified hypoxia inducible domain family, member 1A (Higd1a) as a positive regulator of CcO. Recombinant Higd1a directly integrated into highly purified CcO and increased its activity. Resonance Raman analysis revealed that Higd1a caused structural changes around heme a, the active center that drives the proton pump. Using a mitochondria-targeted ATP biosensor, we showed that knockdown of endogenous Higd1a reduced oxygen consumption and subsequent mitochondrial ATP synthesis, leading to increased cell death in response to hypoxia; all of these phenotypes were rescued by exogenous Higd1a. These results suggest that Higd1a is a previously unidentified regulatory component of CcO, and represents a therapeutic target for diseases associated with reduced CcO activity.

Indexed as

Adenosine TriphosphateAnimalsCattleElectron Transport Complex IVFluorescence Resonance Energy TransferHypoxiaHypoxia-Inducible Factor 1, alpha SubunitMitochondriaOxidative PhosphorylationProtein ConformationAdenosine TriphosphateElectron Transport Complex IVHypoxia-Inducible Factor 1, alpha SubunitATPcytochrome c oxidaseoxidative phosphorylationoxygenresonance Raman spectroscopy

Identifiers

PMID25605899
PMCPMC4321285
OpenAlexW2001442160

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.