Evidence map›Paper›PMID 25605241›Full record

ArticleOncotarget2015

DCLK1 is a broadly dysregulated target against epithelial-mesenchymal transition, focal adhesion, and stemness in clear cell renal carcinoma.

Nathaniel Weygant, Dongfeng Qu, Randal May, Ryan M Tierney, William L Berry, Lichao Zhao, Shweta Agarwal, Parthasarathy Chandrakesan, Harisha R Chinthalapally, Nicholas T Murphy and 5 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 111 citations in OpenAlex.

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  19. Functional assessment of miR‑1291 in colon cancer cells.International journal of oncology · 2022
    Article
  20. DCLK1 autoinhibition and activation in tumorigenesis.Innovation (Cambridge (Mass.)) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Nathaniel WeygantDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Dongfeng QuDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Randal MayDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Ryan M TierneyDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
William L BerryDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Lichao ZhaoDepartment of Pathology, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Shweta AgarwalDepartment of Pathology, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Parthasarathy ChandrakesanDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Harisha R ChinthalapallyDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Nicholas T MurphyDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
James D LiDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Sripathi M SurebanDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Michael J SchlosserCOARE Biotechnology, Oklahoma, OK.
James J TomasekDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma, OK.
Courtney W HouchenDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma, OK.
University of Oklahoma Health Sciences Center · USCoare Biotechnology (United States) · USOklahoma State University Oklahoma City · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Renal clear cell carcinoma (RCC) is the most common type of kidney cancer and the 8th most common cancer overall in the US. RCC survival rates drop precipitously with regional and distant spread and recent studies have demonstrated that RCC presents an epithelial-mesenchymal transition (EMT) phenotype linked to increased recurrence and decreased survival. EMT is a key characteristic of tumor stem cells (TSCs) along with chemo-resistance and radio-resistance, which are also phenotypic of RCC. Targeting these factors is key to increasing the survival of RCC patients. Doublecortin-like kinase 1 (DCLK1) marks TSCs in pancreatic and colorectal cancer and regulates EMT and stemness. Analysis of the Cancer Genome Atlas' RCC dataset revealed that DCLK1 is overexpressed and dysregulated on the mRNA and epigenetic level in more than 93% of RCC tumors relative to adjacent normal tissue. Immunohistochemistry using α-DCLK1 antibody confirmed overexpression and demonstrated a major increase in immunoreactivity in stage II-III tumors compared to normal kidney and stage I tumors. Small-interfering RNA (siRNA) mediated knockdown of DCLK1 resulted in decreased expression of EMT and pluripotency factors and significantly reduced invasion, migration, focal adhesion, drug-resistance, and clonogenic capacity. These findings suggest that DCLK1 is a novel, overexpressed factor in RCC progression that may be targeted to suppress EMT, metastasis, and stemness in early-stage and advanced RCC to increase patient survival. Moreover, the possibility that DCLK1 may mark a population of tumor stem-like cells in RCC should be further investigated in light of these findings.

Indexed as

Blotting, WesternCarcinoma, Renal CellCell Line, TumorCell MovementDNA MethylationDoublecortin-Like KinasesEpithelial-Mesenchymal TransitionFemaleFocal AdhesionsGene Expression ProfilingGene Expression Regulation, NeoplasticHumansIntracellular Signaling Peptides and ProteinsKidney NeoplasmsMaleMiddle AgedDCLK1 protein, humanDoublecortin-Like KinasesIntracellular Signaling Peptides and ProteinsProtein Serine-Threonine Kinases

Identifiers

PMID25605241
PMCPMC4385845
OpenAlexW1511804816

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.