Evidence map›Paper›PMID 25604855›Full record

ArticleEuropean journal of human genetics : EJHG2015

Rare variants in β-Amyloid precursor protein (APP) and Parkinson's disease.

Eva C Schulte, Akio Fukumori, Brit Mollenhauer, Hyun Hor, Thomas Arzberger, Robert Perneczky, Alexander Kurz, Janine Diehl-Schmid, Michael Hüll, Peter Lichtner and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 52 citations in OpenAlex.

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  11. Genetic landscape of early-onset dementia in Hungary.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2022
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  18. Genetic Pathways Involved in the Pathogenesis of Parkinson's Disease.Advances in experimental medicine and biology · 2021
    Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 11 institutions in 5 countries.

Eva C SchulteKlinik und Poliklinik für Neurologie, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
Akio FukumoriDepartment of Biochemistry, Adolf-Butenandt-Institut, Ludwig-Maximilians Universität München, Munich, Germany.
Brit MollenhauerParacelsus Elena Klinik, Kassel, Germany.
Hyun HorGenomics and Disease Group, Centre for Genomic Regulation (CRG), Pompeu Fabra University (UPF) and Centro de Investigación Biomédica en Red en Epidemiología y Salud Pública, Barcelona, Spain.
Thomas ArzbergerInstitut für Neuropathologie, Ludwig-Maximillians Universität München, Munich, Germany.
Robert PerneczkyPsychiatrische Klinik und Poliklinik, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
Alexander KurzPsychiatrische Klinik und Poliklinik, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
Janine Diehl-SchmidPsychiatrische Klinik und Poliklinik, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
Michael HüllPsychiatrische Universitätsklinik, Albert Ludwigs Universität, Freiburg, Germany.
Peter LichtnerInstitut für Humangenetik, Helmholtz Zentrum München, Munich, Germany.
Gertrud EcksteinInstitut für Humangenetik, Helmholtz Zentrum München, Munich, Germany.
Alexander ZimprichDepartment of Neurology, Medical University of Vienna, Vienna, Austria.
Dietrich HaubenbergerDepartment of Neurology, Medical University of Vienna, Vienna, Austria.
Walter PirkerDepartment of Neurology, Medical University of Vienna, Vienna, Austria.
Thomas BrückeNeurologische Klinik, Wilhelminenspital, Vienna, Austria.
Benjamin BereznaiInstitute of Genomic Medicine and Rare Disorders, Semmelweis University, Budapest, Hungary.
Maria J MolnarInstitute of Genomic Medicine and Rare Disorders, Semmelweis University, Budapest, Hungary.
Oswaldo Lorenzo-BetancorNeurogenetics Laboratory, Division of Neurosciences, Center for Applied Medical Research, University of Navarra, Pamplona, Spain.
Pau PastorNeurogenetics Laboratory, Division of Neurosciences, Center for Applied Medical Research, University of Navarra, Pamplona, Spain.ORCID http://orcid.org/0000-0002-7493-8777
Annette PetersInstitut für Epidemiologie II, Helmholtz Zentrum München, Munich, Germany.
Christian GiegerInstitut für Genetische Epidemiologie, Helmholtz Zentrum München, Munich, Germany.
Xavier EstivillGenomics and Disease Group, Centre for Genomic Regulation (CRG), Pompeu Fabra University (UPF) and Centro de Investigación Biomédica en Red en Epidemiología y Salud Pública, Barcelona, Spain.
Thomas MeitingerInstitut für Humangenetik, Helmholtz Zentrum München, Munich, Germany.
Hans A KretzschmarInstitut für Neuropathologie, Ludwig-Maximillians Universität München, Munich, Germany.
Claudia TrenkwalderParacelsus Elena Klinik, Kassel, Germany.
Christian HaassDepartment of Biochemistry, Adolf-Butenandt-Institut, Ludwig-Maximilians Universität München, Munich, Germany.
Juliane WinkelmannKlinik und Poliklinik für Neurologie, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
Helmholtz Zentrum München · DETUM Klinikum · DEMedical University of Vienna · ATBiomedical Research Networking Center on Neurodegenerative Diseases · ESGerman Center for Neurodegenerative Diseases · DELudwig-Maximilians-Universität München · DEParacelsus Elena Klinik Kassel · DESemmelweis University · HUUniversitat Pompeu Fabra · ESUniversity of Freiburg · DEWilhelminen Hospital · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many individuals with Parkinson's disease (PD) develop cognitive deficits, and a phenotypic and molecular overlap between neurodegenerative diseases exists. We investigated the contribution of rare variants in seven genes of known relevance to dementias (β-amyloid precursor protein (APP), PSEN1/2, MAPT (microtubule-associated protein tau), fused in sarcoma (FUS), granulin (GRN) and TAR DNA-binding protein 43 (TDP-43)) to PD and PD plus dementia (PD+D) in a discovery sample of 376 individuals with PD and followed by the genotyping of 25 out of the 27 identified variants with a minor allele frequency <5% in 975 individuals with PD, 93 cases with Lewy body disease on neuropathological examination, 613 individuals with Alzheimer's disease (AD), 182 cases with frontotemporal dementia and 1014 general population controls. Variants identified in APP were functionally followed up by Aβ mass spectrometry in transiently transfected HEK293 cells. PD+D cases harbored more rare variants across all the seven genes than PD individuals without dementia, and rare variants in APP were more common in PD cases overall than in either the AD cases or controls. When additional controls from publically available databases were added, one rare variant in APP (c.1795G>A(p.(E599K))) was significantly associated with the PD phenotype but was not found in either the PD cases or controls of an independent replication sample. One of the identified rare variants (c.2125G>A (p.(G709S))) shifted the Aβ spectrum from Aβ40 to Aβ39 and Aβ37. Although the precise mechanism remains to be elucidated, our data suggest a possible role for APP in modifying the PD phenotype as well as a general contribution of genetic factors to the development of dementia in individuals with PD.

Indexed as

AgedAlzheimer DiseaseAmyloid beta-Protein PrecursorCell LineDementiaDNA-Binding ProteinsFemaleGene FrequencyGenetic VariationGenotypeHEK293 CellsHumansMaleNeurodegenerative DiseasesParkinson DiseaseAmyloid beta-Protein PrecursorDNA-Binding Proteins

Identifiers

PMID25604855
PMCPMC4592093
OpenAlexW1973907011

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.