Evidence map›Paper›PMID 25603427›Full record

ReviewVirulence2014

Transcriptional regulation of bacterial virulence gene expression by molecular oxygen and nitric oxide.

Jeffrey Green, Matthew D Rolfe, Laura J Smith

Open access · goldAbstract readReview
In one paragraph

Review in Virulence, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The critical role ofApplied and environmental microbiology · 2026
    Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Fnr Negatively Regulates Prodigiosin Synthesis inFrontiers in microbiology · 2021
    Article
  16. Interplay between enterohaemorrhagicEmerging microbes & infections · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Jeffrey Greena Krebs Institute; Molecular Biology & Biotechnology; University of Sheffield ; Western Bank , Sheffield , UK.
Matthew D Rolfe
Laura J Smith
University of Sheffield · GBInstitute of Molecular Biology and Biotechnology · BG

Funding

Biotechnology and Biological Sciences Research Council BB/I004122/1Biotechnology and Biological Sciences Research Council BB/K000071/1
6 · The paper itself

Abstract

Molecular oxygen (O2) and nitric oxide (NO) are diatomic gases that play major roles in infection. The host innate immune system generates reactive oxygen species and NO as bacteriocidal agents and both require O2 for their production. Furthermore, the ability to adapt to changes in O2 availability is crucial for many bacterial pathogens, as many niches within a host are hypoxic. Pathogenic bacteria have evolved transcriptional regulatory systems that perceive these gases and respond by reprogramming gene expression. Direct sensors possess iron-containing co-factors (iron-sulfur clusters, mononuclear iron, heme) or reactive cysteine thiols that react with O2 and/or NO. Indirect sensors perceive the physiological effects of O2 starvation. Thus, O2 and NO act as environmental cues that trigger the coordinated expression of virulence genes and metabolic adaptations necessary for survival within a host. Here, the mechanisms of signal perception by key O2- and NO-responsive bacterial transcription factors and the effects on virulence gene expression are reviewed, followed by consideration of these aspects of gene regulation in two major pathogens, Staphylococcus aureus and Mycobacterium tuberculosis.

Indexed as

Gene Expression Regulation, BacterialTranscription, GeneticBacteriaBacterial ProteinsEscherichia coliEscherichia coli ProteinsIronMycobacterium tuberculosisNitric OxideOxidative StressOxygenStaphylococcus aureusTranscription FactorsVirulenceBacterial ProteinsEscherichia coli ProteinsIronNitric OxideOxygenTranscription FactorsAIP, autoinducer peptideArc, Aerobic respiratory controlFNRFNR, fumarate nitrate reduction regulatorGAF, cGMP-specific phosphodiesterase-adenylyl cyclase-FhlA domainiNOS, inducible nitric oxide synthaseiron–sulfur clusterIsc, iron–sulfur cluster biosynthesis machineryMycobacterium tuberculosisnitric oxide sensorsNOX, NADPH oxidaseoxygen sensorsPAS, Per-Amt-Sim domainRNS, reactive nitrogen speciesROS, reactive oxygen speciesStaphylococcus aureusTB, tuberculosisWhiB-like proteins

Identifiers

PMID25603427
PMCPMC4601167
OpenAlexW1992890837

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.