Evidence map›Paper›PMID 25603394›Full record

ArticleThe ISME journal2015

Alnus peptides modify membrane porosity and induce the release of nitrogen-rich metabolites from nitrogen-fixing Frankia.

Lorena Carro, Petar Pujic, Nicole Alloisio, Pascale Fournier, Hasna Boubakri, Anne E Hay, Franck Poly, Philippe François, Valerie Hocher, Peter Mergaert and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
11.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Cereal weevils' antimicrobial peptides: at the crosstalk between development, endosymbiosis and immune response.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Article
  3. Article
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  5. DNA-binding and protein structure of nuclear factors likely acting in genetic information processing in theProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
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  8. The Proteogenome of SymbioticMicroorganisms · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Applied and environmental microbiology · 2018
    Article
  15. Article
  16. Article
  17. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Lorena CarroUniversité Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, France.
Petar PujicUniversité Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, France.
Nicole AlloisioUniversité Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, France.
Pascale FournierUniversité Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, France.
Hasna BoubakriUniversité Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, France.
Anne E HayUniversité Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, France.
Franck PolyUniversité Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, France.
Philippe FrançoisEquipe Rhizogenèse, UMR DIADE (IRD, UM2), Institut de Recherche pour le Développement, Montpellier, France.
Valerie HocherEquipe Rhizogenèse, UMR DIADE (IRD, UM2), Institut de Recherche pour le Développement, Montpellier, France.
Peter MergaertInstitut des Sciences du Végétal, CNRS, UPR 2355, Gif-sur-Yvette, France.
Severine BalmandINSA-Lyon, INRA, UMR203 BF2I, Biologie Fonctionnelle Insectes et Interactions, Villeurbanne, France.
Marjolaine ReyINSA-Lyon, INRA, UMR203 BF2I, Biologie Fonctionnelle Insectes et Interactions, Villeurbanne, France.
Abdelaziz HeddiINSA-Lyon, INRA, UMR203 BF2I, Biologie Fonctionnelle Insectes et Interactions, Villeurbanne, France.
Philippe NormandUniversité Lyon 1, Université de Lyon, CNRS, Ecologie Microbienne, UMR 5557, Villeurbanne, France.
Université Claude Bernard Lyon 1 · FRBiologie Fonctionnelle Insectes et Interactions · FRCentre National de la Recherche Scientifique · FRInstitut de Recherche pour le Développement · FRInstitut des Sciences du Végétal · FRRhizogenesis Lab · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Actinorhizal plant growth in pioneer ecosystems depends on the symbiosis with the nitrogen-fixing actinobacterium Frankia cells that are housed in special root organs called nodules. Nitrogen fixation occurs in differentiated Frankia cells known as vesicles. Vesicles lack a pathway for assimilating ammonia beyond the glutamine stage and are supposed to transfer reduced nitrogen to the plant host cells. However, a mechanism for the transfer of nitrogen-fixation products to the plant cells remains elusive. Here, new elements for this metabolic exchange are described. We show that Alnus glutinosa nodules express defensin-like peptides, and one of these, Ag5, was found to target Frankia vesicles. In vitro and in vivo analyses showed that Ag5 induces drastic physiological changes in Frankia, including an increased permeability of vesicle membranes. A significant release of nitrogen-containing metabolites, mainly glutamine and glutamate, was found in N2-fixing cultures treated with Ag5. This work demonstrates that the Ag5 peptide is central for Frankia physiology in nodules and uncovers a novel cellular function for this large and widespread defensin peptide family.

Indexed as

AlnusAmmoniaCell MembraneDefensinsFrankiaMicroarray AnalysisNitrogenNitrogenaseNitrogen FixationPlant ProteinsPlant RootsPorositySymbiosisAmmoniaDefensinsNitrogenNitrogenasePlant Proteins

Identifiers

PMID25603394
PMCPMC4511928
OpenAlexW2032329902

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.