Evidence map›Paper›PMID 25602522›Full record

ArticleCell cycle (Georgetown, Tex.)2015

The impact of the HIRA histone chaperone upon global nucleosome architecture.

Csenge Gal, Karen M Moore, Konrad Paszkiewicz, Nicholas A Kent, Simon K Whitehall

Open access · hybridAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. The longevity and reversibility of quiescence inCell cycle (Georgetown, Tex.) · 2023
    Article
  2. Maize PPR278 Functions in Mitochondrial RNA Splicing and Editing.International journal of molecular sciences · 2022
    Article
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  11. Chinese medical journal · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Csenge Gala Institute for Cell & Molecular Biosciences ; Newcastle University ; Newcastle upon Tyne , UK.
Karen M Moore
Konrad Paszkiewicz
Nicholas A Kent
Simon K Whitehall
Newcastle University · GBUniversity of Exeter · GBCardiff University · GB

Funding

Medical Research CouncilWellcome Trust WT 097823/Z/11/ZWellcome Trust WT097835MF
6 · The paper itself

Abstract

HIRA is an evolutionarily conserved histone chaperone that mediates replication-independent nucleosome assembly and is important for a variety of processes such as cell cycle progression, development, and senescence. Here we have used a chromatin sequencing approach to determine the genome-wide contribution of HIRA to nucleosome organization in Schizosaccharomyces pombe. Cells lacking HIRA experience a global reduction in nucleosome occupancy at gene sequences, consistent with the proposed role for HIRA in chromatin reassembly behind elongating RNA polymerase II. In addition, we find that at its target promoters, HIRA commonly maintains the full occupancy of the -1 nucleosome. HIRA does not affect global chromatin structure at replication origins or in rDNA repeats but is required for nucleosome occupancy in silent regions of the genome. Nucleosome organization associated with the heterochromatic (dg-dh) repeats located at the centromere is perturbed by loss of HIRA function and furthermore HIRA is required for normal nucleosome occupancy at Tf2 LTR retrotransposons. Overall, our data indicate that HIRA plays an important role in maintaining nucleosome architecture at both euchromatic and heterochromatic loci.

Indexed as

ChromatinChromatin Assembly and DisassemblyHistonesNucleosomesPromoter Regions, GeneticRNA Polymerase IISchizosaccharomycesSchizosaccharomyces pombe ProteinsTranscription FactorsChromatinhip1 protein, S pombeHistonesNucleosomesRNA Polymerase IISchizosaccharomyces pombe ProteinsTranscription FactorsChromatinheterochromatinHIRAhistone chaperonenucleosome assemblyS. pombe

Identifiers

PMID25602522
PMCPMC4614360
OpenAlexW1983631626

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.