Evidence map›Paper›PMID 25602029›Full record

ArticleThe Plant journal : for cell and molecular biology2015

A tonoplast Glu/Asp/GABA exchanger that affects tomato fruit amino acid composition.

Christopher J Snowden, Benjamin Thomas, Charles J Baxter, J Andrew C Smith, Lee J Sweetlove

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
14.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
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  6. The amino acid permeaseHorticulture research · 2025
    Article
  7. Review
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  9. ComparativeFoods (Basel, Switzerland) · 2024
    Article
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  20. Defective cytokinin signaling reprograms lipid and flavonoid gene-to-metabolite networks to mitigate high salinity inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Christopher J SnowdenDepartment of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK.
Benjamin Thomas
Charles J Baxter
J Andrew C Smith
Lee J Sweetlove
University of Oxford · GBSyngenta (United Kingdom) · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H00338X/1
6 · The paper itself

Abstract

Vacuolar accumulation of acidic metabolites is an important aspect of tomato fruit flavour and nutritional quality. The amino acids Asp and Glu accumulate to high concentrations during ripening, while γ-aminobutyrate (GABA) shows an approximately stoichiometric decline. Given that GABA can be catabolised to form Glu and subsequently Asp, and the requirement for the fruit to maintain osmotic homeostasis during ripening, we hypothesised the existence of a tonoplast transporter that exports GABA from the vacuole in exchange for import of either Asp or Glu. We show here that the tomato vacuolar membrane possesses such a transport property: transport of Glu across isolated tonoplast vesicle membranes was trans-stimulated in counterexchange mode by GABA, Glu and Asp. We identified SlCAT9 as a candidate protein for this exchanger using quantitative proteomics of a tonoplast-enriched membrane fraction. Transient expression of a SlCAT9-YFP fusion in tobacco confirmed a tonoplast localisation. The function of the protein was examined by overexpression of SlCAT9 in transgenic tomato plants. Tonoplast vesicles isolated from transgenic plants showed higher rates of Glu and GABA transport than wild-type (WT) only when assayed in counterexchange mode with Glu, Asp, or GABA. Moreover, there were substantial increases in the content of all three cognate amino acids in ripe fruit from the transgenic plants. We conclude that SlCAT9 is a tonoplast Glu/Asp/GABA exchanger that strongly influences the accumulation of these amino acids during fruit development.

Indexed as

Amino AcidsAspartic AcidBiological TransportDipeptidesFruitgamma-Aminobutyric AcidGenes, ReporterGlutamic AcidIntracellular MembranesNicotianaPlant ProteinsPlants, Genetically ModifiedProteomeSolanum lycopersicumVacuolesAmino AcidsAspartic AcidDipeptidesgamma-Aminobutyric Acidgamma-glutamylaspartic acidGlutamic AcidPlant ProteinsProteomeamino acidripeningtomatotransportvacuole

Identifiers

PMID25602029
PMCPMC4950293
OpenAlexW2063646039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.