Evidence map›Paper›PMID 25601762›Full record

ArticleThe pharmacogenomics journal2015

Pharmacodynamic genome-wide association study identifies new responsive loci for glucocorticoid intervention in asthma.

Y Wang, C Tong, Z Wang, Z Wang, D Mauger, K G Tantisira, E Israel, S J Szefler, V M Chinchilli, H A Boushey and 3 more

Abstract read
In one paragraph

Article in The pharmacogenomics journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Genome-wide association study of inhaled corticosteroid response in admixed children with asthma.Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology · 2019
    Trial
  2. Review
  3. Article
  4. Identification ofJournal of personalized medicine · 2021
    Article
  5. Review
  6. Review
  7. Advances in asthma and allergic disease genetics: Is bigger always better?The Journal of allergy and clinical immunology · 2019
    Review
  8. Article
  9. Review
  10. Review
  11. How does race and ethnicity effect the precision treatment of asthma?Expert review of precision medicine and drug development · 2019
    Article
  12. Mapping genes for drug chronotherapy.Drug discovery today · 2018
    Review
  13. Asthma Pharmacogenomics: 2015 Update.Current allergy and asthma reports · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Y WangDivision of Biostatistics and Bioinformatics, Department of Public Health Sciences, Penn State College of Medicine, Hershey, PA, USA.
C TongDivision of Biostatistics and Bioinformatics, Department of Public Health Sciences, Penn State College of Medicine, Hershey, PA, USA.
Z WangDivision of Biostatistics and Bioinformatics, Department of Public Health Sciences, Penn State College of Medicine, Hershey, PA, USA.
Z WangDivision of Biostatistics, Yale School of Public Health, New Haven, CT, USA.
D MaugerDivision of Biostatistics and Bioinformatics, Department of Public Health Sciences, Penn State College of Medicine, Hershey, PA, USA.
K G TantisiraChanning Laboratory, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
E IsraelChanning Laboratory, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
S J SzeflerNational Jewish Health and University of Colorado School of Medicine, Denver, CO, USA.
V M ChinchilliDivision of Biostatistics and Bioinformatics, Department of Public Health Sciences, Penn State College of Medicine, Hershey, PA, USA.
H A BousheyDepartment of Medicine, University of California, San Francisco, CA, USA.
S C LazarusDepartment of Medicine, University of California, San Francisco, CA, USA.
R F LemanskeDepartment of Medicine, University of Wisconsin, Madison, WI, USA.
R WuDivision of Biostatistics and Bioinformatics, Department of Public Health Sciences, Penn State College of Medicine, Hershey, PA, USA.

Funding

Data Coordinating Center for the NHLBI Asthma Network (AsthmaNet)U10HL098115 · NHLBI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI MAUGER, DAVID T. · 2009 to 2015
$57.6M
PEDIATRIC ASTHMA NETWORK DATA COORDINATING CENTERU10HL064313 · NHLBI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI MAUGER, DAVID T. · 1999 to 2008
$18.3M
Penn State Clinical and Translational Science InstituteUL1TR000127 · NCATS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI SINOWAY, LAWRENCE I · 2012 to 2015
$17.1M
ASTHMA NETWORK DATA COORDINATING CENTERU10HL051845 · NHLBI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI CHINCHILLI, VERNON M. · 1993 to 2002
$5.1M
INFORMATIVE STUDIES IN CLINICAL ASTHMAU10HL051831 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI ISRAEL, ELLIOT · 1993 to 2002
$2.9M
Constitutive and Agent-Based Multiscale Models to Improve Vein Graft SurvivalU01HL119178 · NHLBI · UNIVERSITY OF FLORIDA · PI BERCELI, SCOTT A, GARBEY, MARC · 2013 to 2018
$2.7M
STEROID AND TARGET CELL FOCUS IN THE TREATMENT OF ASTHMAU10HL051834 · NHLBI · NATIONAL JEWISH HEALTH · PI MARTIN, RICHARD J · 1993 to 2002
$2.3M
ASTHMA CLINICAL RESEARCH NETWORK CENTERU10HL051823 · NHLBI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI BOUSHEY, HOMER A · 1993 to 2002
$2.2M
ASTHMA CLINICAL RESEARCH NETWORK--MINORITY CENTERU10HL056443 · NHLBI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI DIMANGO, EMILY · 1996 to 2002
$2.1M
IMMUNOMODULATING DRUG THERAPY IN ASTHMAU10HL051843 · NHLBI · UNIVERSITY OF WISCONSIN MADISON · PI LEMANSKE, ROBERT F · 1993 to 2002
$2.0M
JEFFERSON INTERACTIVE ASTHMA CLINICAL RESEARCH GROUPU10HL051810 · NHLBI · THOMAS JEFFERSON UNIVERSITY · PI LEONE, FRANK T · 1993 to 2002
$1.5M
NCATS NIH HHS UL1 TR000127NHLBI NIH HHS U01 HL119178NHLBI NIH HHS U10 HL051823NHLBI NIH HHS U10 HL051831NHLBI NIH HHS U10 HL051834NHLBI NIH HHS U10 HL051843NHLBI NIH HHS U10 HL051845NHLBI NIH HHS U10 HL056443NHLBI NIH HHS U10 HL064313NHLBI NIH HHS U10 HL098115NHLBI NIH HHS U10 HL-51810NHLBI NIH HHS U10 HL-51823NHLBI NIH HHS U10 HL-51831NHLBI NIH HHS U10 HL-51834NHLBI NIH HHS U10 HL-51843NHLBI NIH HHS U10 HL-51845NHLBI NIH HHS U10 HL-56443PHS HHS NIH/NHLBI-1U10HL098115
6 · The paper itself

Abstract

Asthma is a chronic lung disease that has a high prevalence. The therapeutic intervention of this disease can be made more effective if genetic variability in patients' response to medications is implemented. However, a clear picture of the genetic architecture of asthma intervention response remains elusive. We conducted a genome-wide association study (GWAS) to identify drug response-associated genes for asthma, in which 909 622 SNPs were genotyped for 120 randomized participants who inhaled multiple doses of glucocorticoids. By integrating pharmacodynamic properties of drug reactions, we implemented a mechanistic model to analyze the GWAS data, enhancing the scope of inference about the genetic architecture of asthma intervention. Our pharmacodynamic model observed associations of genome-wide significance between dose-dependent response to inhaled glucocorticoids (measured as %FEV1) and five loci (P=5.315 × 10(-7) to 3.924 × 10(-9)), many of which map to metabolic genes related to lung function and asthma risk. All significant SNPs detected indicate a recessive effect, at which the homozygotes for the mutant alleles drive variability in %FEV1. Significant associations were well replicated in three additional independent GWAS studies. Pooled together over these three trials, two SNPs, chr6 rs6924808 and chr11 rs1353649, display an increased significance level (P=6.661 × 10(-16) and 5.670 × 10(-11)). Our study reveals a general picture of pharmacogenomic control for asthma intervention. The results obtained help to tailor an optimal dose for individual patients to treat asthma based on their genetic makeup.

Indexed as

Genome-Wide Association StudyAdultAsthmaFemaleGenetic Predisposition to DiseaseGenotypeGlucocorticoidsHumansMalePharmacogeneticsPolymorphism, Single NucleotideGlucocorticoids

Identifiers

PMID25601762
PMCPMC6156797

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.