Evidence map›Paper›PMID 25601203›Full record

ArticleImmunity2015

T cell receptor cross-reactivity between similar foreign and self peptides influences naive cell population size and autoimmunity.

Ryan W Nelson, Daniel Beisang, Noah J Tubo, Thamotharampillai Dileepan, Darin L Wiesner, Kirsten Nielsen, Marcel Wüthrich, Bruce S Klein, Dmitri I Kotov, Justin A Spanier and 3 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 116 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed, 1 pooled it
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 1 synthesis or guideline pooled it, 162 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Female-enrichedbioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. PD-1 and CD73 on naive CD4Nature immunology · 2025
    Article
  14. Article
  15. CD4Immunity · 2024
    Article
  16. Article
  17. How persistent infection overcomes peripheral tolerance mechanisms to cause T cell-mediated autoimmune disease.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  18. T cell help shapes B cell tolerance.Science immunology · 2024
    Article
  19. Article
  20. Article

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Ryan W Nelson
Daniel Beisang
Noah J Tubo
Thamotharampillai Dileepan
Darin L Wiesner
Kirsten Nielsen
Marcel Wüthrich
Bruce S Klein
Dmitri I Kotov
Justin A Spanier
Brian T Fife
James J Moon
Marc K Jenkins
University of Minnesota Medical Center · USUniversity of Wisconsin–Madison · USHarvard University · US

Funding

Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1991 to 2026
$35.3M
University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR000114 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R · 2012 to 2015
$35.0M
Type I interferons in tolerance in the steady stateP01AI035296 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI JENKINS, MARC KEVIN · 1993 to 2023
$31.1M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008244 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI SHIMIZU, YOJI · 1988 to 2024
$13.6M
TRAINING GRANT IN MICROBIOLOGY/CANCER RESEARCHT32CA009138 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Scott M. Dehm · 1985 to 2026
$11.3M
Tetramer CoreU19AI095261 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI VON ANDRIAN, ULRICH H · 2011 to 2015
$10.8M
PROTECTIVE IMMUNE RESPONSES TO BLASTOMYCES DERMATITIDISR01AI040996 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KLEIN, BRUCE STEVEN, WUETHRICH, MARCEL · 1997 to 2023
$10.4M
TRACKING CD4+ MEMORY T CELLS IN VIVOR01AI039614 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI JENKINS, MARC KEVIN · 1996 to 2023
$8.7M
Molecular Pathogenesis of BlastomycosisR37AI035681 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI BRUCE Steven KLEIN · 2004 to 2026
$6.9M
IMMUNOLOGY TRAINING PROGRAMT32AI007313 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Carla Rothlin · 1989 to 2026
$5.7M
Regulation of vaccine-induced anti-fungal Th17 cellsR01AI093553 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI WUETHRICH, MARCEL · 2011 to 2020
$4.5M
TRAINING GRANT IN DIABETES, ENDOCRINOLOGY, &METABOLISMT32DK007203 · NIDDK · UNIVERSITY OF MINNESOTA TWIN CITIES · PI LISA Senye CHOW, Douglas G Mashek · 1986 to 2026
$4.3M
NCATS NIH HHS UL1 TR000114NCI NIH HHS T32 CA009138NIAID NIH HHS P01 AI035296NIAID NIH HHS R01 AI039614NIAID NIH HHS R01 AI040996NIAID NIH HHS R01 AI080275NIAID NIH HHS R01 AI093553NIAID NIH HHS R01 AI103760NIAID NIH HHS R01 AI105816NIAID NIH HHS R01 AI107020NIAID NIH HHS R21 AI105816NIAID NIH HHS R37 AI027998NIAID NIH HHS R37 AI035681NIAID NIH HHS T32 AI007313NIAID NIH HHS U19 AI095261NIDDK NIH HHS F30 DK093242NIDDK NIH HHS P30 DK043351NIDDK NIH HHS T32 DK007203NIGMS NIH HHS T32 GM008244
6 · The paper itself

Abstract

T cell receptor (TCR) cross-reactivity between major histocompatibility complex II (MHCII)-binding self and foreign peptides could influence the naive CD4(+) T cell repertoire and autoimmunity. We found that nonamer peptides that bind to the same MHCII molecule only need to share five amino acids to cross-react on the same TCR. This property was biologically relevant because systemic expression of a self peptide reduced the size of a naive cell population specific for a related foreign peptide by deletion of cells with cross-reactive TCRs. Reciprocally, an incompletely deleted naive T cell population specific for a tissue-restricted self peptide could be triggered by related microbial peptides to cause autoimmunity. Thus, TCR cross-reactivity between similar self and foreign peptides can reduce the size of certain foreign peptide-specific T cell populations and might allow T cell populations specific for tissue-restricted self peptides to cause autoimmunity after infection.

Indexed as

AnimalsAutoimmunityCD4-Positive T-LymphocytesCells, CulturedClonal Selection, Antigen-MediatedCross ReactionsEncephalomyelitis, Autoimmune, ExperimentalHistocompatibility Antigens Class IIHumansMiceMice, Inbred C57BLMultiple SclerosisMutagenesis, Site-DirectedMutationMyelin-Oligodendrocyte GlycoproteinPeptide FragmentsHistocompatibility Antigens Class IIMyelin-Oligodendrocyte GlycoproteinPeptide FragmentsReceptors, Antigen, T-Cell

Identifiers

PMID25601203
PMCPMC4355167
OpenAlexW2081779519

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.