Evidence map›Paper›PMID 25599833›Full record

ArticleThe New phytologist2015

ZmpTAC12 binds single-stranded nucleic acids and is essential for accumulation of the plastid-encoded polymerase complex in maize.

Jeannette Pfalz, Ute Holtzegel, Alice Barkan, Wolfram Weisheit, Maria Mittag, Thomas Pfannschmidt

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Regreening mechanisms in cucumber: insights from a CsSIG2 mutation affecting chloroplast development.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  5. Comparative analyses of chloroplast genomes inFrontiers in plant science · 2025
    Article
  6. Article
  7. Regulation of chloroplast biogenesis, development, and signaling by endogenous and exogenous cues.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Plant height heterosis is quantitatively associated with expression levels of plastid ribosomal proteins.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  13. Article
  14. Article
  15. Genome communication in plants mediated by organelle-n-ucleus-located proteins.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  16. Review
  17. Frontiers in plant science · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Jeannette PfalzDepartment of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, D-07743, Jena, Germany.
Ute HoltzegelDepartment of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, D-07743, Jena, Germany.
Alice BarkanInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97403, USA.
Wolfram WeisheitDepartment of General Botany, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, D-07743, Jena, Germany.
Maria MittagDepartment of General Botany, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, D-07743, Jena, Germany.
Thomas PfannschmidtDepartment of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, D-07743, Jena, Germany.
Friedrich Schiller University Jena · DECEA Grenoble · FRUniversity of Oregon · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plastid-encoded plastid RNA polymerase (PEP) represents the major transcription machinery in mature chloroplasts. Proteomic studies identified four plastome- and at least ten nuclear-encoded proteins making up this multimeric enzyme. Depletion of single subunits is known to result in strongly diminished PEP activity causing severe defects in chloroplast biogenesis. Here, we characterized one PEP subunit in maize, ZmpTAC12, and investigated the molecular basis underlying PEP-deficiency in Zmptac12 mutants. We show that the ZmpTAC12 gene encodes two different protein isoforms, both of which localize dually in chloroplasts and nuclei. Moreover, both variants assemble into the PEP-complex. Analysis of PEP-complex assembly in various maize mutants lacking different PEP-complex components demonstrates that ZmpTAC12, ZmpTAC2, ZmpTAC10 and ZmMurE are each required to accumulate a fully assembled PEP-complex. Antibodies to ZmpTAC12 coimmunoprecipitate a subset of plastid RNAs that are synthesized by PEP-dependent transcription. Gel mobility shift analyses with recombinant ZmpTAC12 revealed binding capabilities with ssRNA and ssDNA, but not dsDNA. Collectively these data demonstrate that ZmpTAC12 is required for the proper build-up of the PEP-complex and that it interacts with single-stranded nucleic acids.

Indexed as

ChloroplastsDNA-Directed RNA PolymerasesGene ExpressionGenome, PlantMolecular Sequence DataPlant ProteinsProtein IsoformsProtein SubunitsZea maysDNA-Directed RNA PolymerasesPlant ProteinsProtein IsoformsProtein Subunitschloroplast biogenesisgene expressionplastid-encoded plastid RNA polymerase (PEP)-polymerasessDN/RNA-bindingZea mays (maize)ZmpTAC12

Identifiers

PMID25599833
PMCPMC6680207
OpenAlexW2164630659

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.