Evidence map›Paper›PMID 25599398›Full record

ArticleNature structural & molecular biology2015

Ring closure activates yeast γTuRC for species-specific microtubule nucleation.

Justin M Kollman, Charles H Greenberg, Sam Li, Michelle Moritz, Alex Zelter, Kimberly K Fong, Jose-Jesus Fernandez, Andrej Sali, John Kilmartin, Trisha N Davis and 1 more

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Structure of the γ-tubulin ring complex-capped microtubule.Nature structural & molecular biology · 2024
    Article
  10. Article
  11. Article
  12. Native molecular architectures of centrosomes inbioRxiv : the preprint server for biology · 2024
    Article
  13. Review
  14. Mechanisms underlying spindle assembly and robustness.Nature reviews. Molecular cell biology · 2023
    Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Microtubule Anchoring: Attaching Dynamic Polymers to Cellular Structures.Frontiers in cell and developmental biology · 2022
    Review
  20. γ-Tubulin in microtubule nucleation and beyond.Frontiers in cell and developmental biology · 2022
    Review

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Justin M KollmanDepartment of Biochemistry, University of Washington, Seattle, Washington, USA.
Charles H Greenberg1] Department of Bioengineering and Therapeutic Sciences, University of California at San Francisco, San Francisco, California, USA. [2] Department of Pharmaceutical Chemistry, University of California at San Francisco, San Francisco, California, USA. [3] California Institute for Quantitative Biosciences (QB3), University of California at San Francisco, San Francisco, California, USA.ORCID 0000000344128527
Sam LiDepartment of Biochemistry and Biophysics, University of California at San Francisco, San Francisco, California, USA.
Michelle MoritzDepartment of Biochemistry and Biophysics, University of California at San Francisco, San Francisco, California, USA.
Alex ZelterDepartment of Biochemistry, University of Washington, Seattle, Washington, USA.
Kimberly K FongDepartment of Biochemistry, University of Washington, Seattle, Washington, USA.
Jose-Jesus FernandezCentro Nacional de Biotecnología, Consejo Superior de Investigaciones Cientificas, Madrid, Spain.
Andrej Sali1] Department of Bioengineering and Therapeutic Sciences, University of California at San Francisco, San Francisco, California, USA. [2] Department of Pharmaceutical Chemistry, University of California at San Francisco, San Francisco, California, USA. [3] California Institute for Quantitative Biosciences (QB3), University of California at San Francisco, San Francisco, California, USA.
John KilmartinMedical Research Council Laboratory of Molecular Biology, Cambridge, UK.
Trisha N DavisDepartment of Biochemistry, University of Washington, Seattle, Washington, USA.ORCID 0000000347973152
David A Agard1] Department of Biochemistry and Biophysics, University of California at San Francisco, San Francisco, California, USA. [2] Howard Hughes Medical Institute, University of California at San Francisco, San Francisco, California, USA.

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008284 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORTEMME, TANJA · 1988 to 2022
$10.1M
MOLECULAR ANALYSIS OF THE SPINDLE POLE BODYR01GM040506 · NIGMS · UNIVERSITY OF WASHINGTON · PI DAVIS, TRISHA N. · 1988 to 2018
$8.6M
The Yeast Centrosome - Structure Assembly & FunctionP01GM105537 · NIGMS · UNIVERSITY OF COLORADO · PI WINEY, MARK · 2014 to 2018
$8.3M
Microtubule Nucleation: Structure & MechanismR01GM031627 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AGARD, DAVID A. · 1985 to 2016
$6.1M
Structure & Mechanism: microtubule nucleation, centrosomes, phage cytoskeletonR35GM118099 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AGARD, DAVID A. · 2016 to 2022
$3.6M
Integrative Program in Complex Biological System (ipCBS)T32EB009383 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MARSHALL, WALLACE, WEINER, ORION D · 2009 to 2022
$3.2M
Howard Hughes Medical InstituteNIBIB NIH HHS T32 EB009383NIGMS NIH HHS P01 GM105537NIGMS NIH HHS R01 GM031627NIGMS NIH HHS R01 GM040506NIGMS NIH HHS R35 GM118099NIGMS NIH HHS T32 GM007270NIGMS NIH HHS T32 GM008284
6 · The paper itself

Abstract

The γ-tubulin ring complex (γTuRC) is the primary microtubule nucleator in cells. γTuRC is assembled from repeating γ-tubulin small complex (γTuSC) subunits and is thought to function as a template by presenting a γ-tubulin ring that mimics microtubule geometry. However, a previous yeast γTuRC structure showed γTuSC in an open conformation that prevents matching to microtubule symmetry. By contrast, we show here that γ-tubulin complexes are in a closed conformation when attached to microtubules. To confirm the functional importance of the closed γTuSC ring, we trapped the closed state and determined its structure, showing that the γ-tubulin ring precisely matches microtubule symmetry and providing detailed insight into γTuRC architecture. Importantly, the closed state is a stronger nucleator, thus suggesting that this conformational switch may allosterically control γTuRC activity. Finally, we demonstrate that γTuRCs have a strong preference for tubulin from the same species.

Indexed as

MicrotubulesProtein BindingProtein Structure, QuaternaryProtein Structure, SecondarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTubulinSaccharomyces cerevisiae ProteinsTubulin

Identifiers

PMID25599398
PMCPMC4318760

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.