Evidence map›Paper›PMID 25598430›Full record

ArticleInternational journal of cancer2015

Genetic variants in one-carbon metabolism genes and breast cancer risk in European American and African American women.

Zhihong Gong, Song Yao, Gary Zirpoli, Ting-Yuan David Cheng, Michelle Roberts, Thaer Khoury, Gregory Ciupak, Warren Davis, Karen Pawlish, Lina Jandorf and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of cancer, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
  6. Impact of Gene-Environment Interactions on Cancer Development.International journal of environmental research and public health · 2020
    Review
  7. Article
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  13. Association ofJournal of Cancer · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Zhihong GongDepartment of Cancer Prevention & Control, Roswell Park Cancer Institute, Buffalo, NY.
Song YaoDepartment of Cancer Prevention & Control, Roswell Park Cancer Institute, Buffalo, NY.
Gary ZirpoliDepartment of Cancer Prevention & Control, Roswell Park Cancer Institute, Buffalo, NY.
Ting-Yuan David ChengDepartment of Cancer Prevention & Control, Roswell Park Cancer Institute, Buffalo, NY.
Michelle RobertsDepartment of Cancer Prevention & Control, Roswell Park Cancer Institute, Buffalo, NY.
Thaer KhouryDepartment of Pathology, Roswell Park Cancer Institute, Buffalo, NY.
Gregory CiupakDepartment of Cancer Prevention & Control, Roswell Park Cancer Institute, Buffalo, NY.
Warren DavisDepartment of Cancer Prevention & Control, Roswell Park Cancer Institute, Buffalo, NY.
Karen PawlishNew Jersey State Cancer Registry, New Jersey Department of Health, Trenton, NJ.
Lina JandorfDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY.
Dana H BovbjergDepartment of Psychiatry, University of Pittsburgh Cancer Institute, Pittsburgh, PA.
Elisa V BanderaDepartment of Cancer Prevention and Control, Rutgers Cancer Institute of New Jersey, New Brunswick, NJ.
Christine B AmbrosoneDepartment of Cancer Prevention & Control, Roswell Park Cancer Institute, Buffalo, NY.
Roswell Park Comprehensive Cancer Center · USEnvironmental and Occupational Health Sciences Institute · USIcahn School of Medicine at Mount Sinai · USNew Jersey Department of Health · USUniversity at Buffalo, State University of New York · USUPMC Hillman Cancer Center · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
TRANSCRIPTIONAL PROFILINGP30CA072720 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI Chang S Chan · 1997 to 2026
$94.5M
Reproduction, Lactation and Hormonal Factors in Breast Cancer SubtypesP01CA151135 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI AMBROSONE, CHRISTINE B., OLSHAN, ANDREW · 2011 to 2017
$18.1M
NEW JERSEY CANCER PREVENTION & CONTROL PROGRAMU58DP003931 · DP · NEW JERSEY STATE DEPT/HEALTH/SENIOR SRVS · PI RODRIQUEZ, GLORIA · 2012 to 2014
$11.9M
Race &Risk Factors for Early/Aggressive Breast CancerR01CA100598 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI AMBROSONE, CHRISTINE B. · 2004 to 2008
$4.8M
Aberrant DNA methylation patterns of miRNAs and breast cancer racial disparitiesK07CA178293 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI GONG, ZHIHONG · 2014 to 2018
$720k
Obesity in ovarian cancer prognosisK22CA138563 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI BANDERA, ELISA V · 2010 to 2012
$605k
NCCDPHP CDC HHS U58 DP003931NCI NIH HHS HHSN261201300021CNCI NIH HHS K07 CA178293NCI NIH HHS K22 CA138563NCI NIH HHS P01 CA151135NCI NIH HHS P30 CA016056NCI NIH HHS P30 CA072720NCI NIH HHS R01 CA100598
6 · The paper itself

Abstract

Folate-mediated one-carbon metabolism plays critical roles in DNA synthesis, repair and DNA methylation. The impact of single nucleotide polymorphisms (SNPs) in folate-metabolizing enzymes has been investigated in risk of breast cancer among European or Asian populations, but not among women of African ancestry. We conducted a comprehensive analysis of SNPs in eleven genes involved in one-carbon metabolism and risk of breast cancer in 1,275 European-American (EA) and 1,299 African-American (AA) women who participated in the Women's Circle of Health Study. Allele frequencies varied significantly between EA and AA populations. A number of these SNPs, specifically in genes including MTR, MTRR, SHMT1, TYMS and SLC19A1, were associated with overall breast cancer risk, as well as risk by estrogen receptor (ER) status, in either EA or AA women. Associations appeared to be modified by dietary folate intake. Although single-SNP associations were not statistically significant after correcting for multiple comparisons, polygenetic score analyses revealed significant associations with breast cancer risk. Per unit increase of the risk score was associated with a modest 19 to 50% increase in risk of breast cancer overall, ER positive or ER negative cancer (all p < 0.0005) in EAs or AAs. In summary, our data suggest that one-carbon metabolizing gene polymorphisms could play a role in breast cancer and that may differ between EA and AA women.

Indexed as

Genetic Predisposition to DiseaseGenetic VariationAdultAllelesBlack or African AmericanBlack PeopleBreast NeoplasmsCase-Control StudiesDietEuropeFemaleFolic AcidGene FrequencyGenotypeHumansMiddle AgedFolic AcidReceptors, EstrogenAfrican Americanbreast cancerEuropean Americanone-carbon metabolismpolymorphisms

Identifiers

PMID25598430
PMCPMC4437886
OpenAlexW1574560685

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.