Evidence map›Paper›PMID 25596510›Full record

ArticleMetabolic engineering2015

Metabolic transistor strategy for controlling electron transfer chain activity in Escherichia coli.

Hui Wu, Leepika Tuli, George N Bennett, Ka-Yiu San

Open access · greenAbstract read
In one paragraph

Article in Metabolic engineering, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Reprogramming the metabolism ofSynthetic and systems biotechnology · 2021
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. ATP regulation in bioproduction.Microbial cell factories · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Hui WuDepartment of Bioengineering, Rice University, Houston, TX 77005, United States; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, China.
Leepika TuliDepartment of Bioengineering, Rice University, Houston, TX 77005, United States.
George N BennettDepartment of Chemical and Biomolecular Engineering, Rice University, Houston, TX 77005, United States.
Ka-Yiu SanDepartment of Bioengineering, Rice University, Houston, TX 77005, United States; Department of Chemical and Biomolecular Engineering, Rice University, Houston, TX 77005, United States. Electronic address: ksan@rice.edu.
Rice University · USEast China University of Science and Technology · CN

Funding

Designed feedback regulation of electron transport energeticsR01GM090152 · NIGMS · RICE UNIVERSITY · PI SAN, KA-YIU · 2009 to 2011
$558k
NIGMS NIH HHS R01 GM090152PHS HHS NIHGM090152
6 · The paper itself

Abstract

A novel strategy to finely control a large metabolic flux by using a "metabolic transistor" approach was established. In this approach a small change in the level or availability of an essential component for the process is controlled by adding a competitive reaction that affects a precursor or an intermediate in its biosynthetic pathway. The change of the basal level of the essential component, considered as a base current in a transistor, has a large effect on the flux through the major pathway. In this way, the fine-tuning of a large flux can be accomplished. The "metabolic transistor" strategy was applied to control electron transfer chain function by manipulation of the quinone synthesis pathway in Escherichia coli. The achievement of a theoretical yield of lactate production under aerobic conditions via this strategy upon manipulation of the biosynthetic pathway of the key participant, ubiquinone-8 (Q8), in an E. coli strain provides an in vivo, genetically tunable means to control the activity of the electron transfer chain and manipulate the production of reduced products while limiting consumption of oxygen to a defined amount.

Indexed as

Electron Transport Chain Complex ProteinsEscherichia coliEscherichia coli ProteinsLactic AcidOxygen ConsumptionUbiquinoneElectron Transport Chain Complex ProteinsEscherichia coli ProteinsLactic AcidUbiquinoneubiquinone 8Electron transfer chainEscherichia coliLactateMetabolic transistorOxygenQuinone

Identifiers

PMID25596510
PMCPMC4355220
OpenAlexW2076920204

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.