Evidence map›Paper›PMID 25595768›Full record

ArticleApplied and environmental microbiology2015

Thermal and solvent stress cross-tolerance conferred to Corynebacterium glutamicum by adaptive laboratory evolution.

Shinichi Oide, Wataru Gunji, Yasuhiro Moteki, Shogo Yamamoto, Masako Suda, Toru Jojima, Hideaki Yukawa, Masayuki Inui

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Aerobic Utilization of Methanol for Microbial Growth and Production.Advances in biochemical engineering/biotechnology · 2022
    Article
  10. Article
  11. Review
  12. Review
  13. Accelerated Growth ofJournal of microbiology and biotechnology · 2020
    Article
  14. Changes in Cell Membrane Fatty Acid Composition ofJournal of microbiology and biotechnology · 2020
    Article
  15. Role of ClpB FromFrontiers in microbiology · 2020
    Article
  16. Complete Genomic Analysis ofFrontiers in bioengineering and biotechnology · 2020
    Article
  17. Article
  18. Article
  19. Selection of ThermotolerantFood technology and biotechnology · 2019
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Shinichi OideResearch Institute of Innovative Technology for the Earth, Kizugawa, Kyoto, Japan.
Wataru GunjiResearch Institute of Innovative Technology for the Earth, Kizugawa, Kyoto, Japan.
Yasuhiro MotekiResearch Institute of Innovative Technology for the Earth, Kizugawa, Kyoto, Japan.
Shogo YamamotoResearch Institute of Innovative Technology for the Earth, Kizugawa, Kyoto, Japan.
Masako SudaResearch Institute of Innovative Technology for the Earth, Kizugawa, Kyoto, Japan.
Toru JojimaResearch Institute of Innovative Technology for the Earth, Kizugawa, Kyoto, Japan.
Hideaki YukawaResearch Institute of Innovative Technology for the Earth, Kizugawa, Kyoto, Japan.
Masayuki InuiResearch Institute of Innovative Technology for the Earth, Kizugawa, Kyoto, Japan Graduate School of Biological Sciences, Nara Institute of Science and Technology, Takayama, Ikoma, Nara, Japan mmg-lab@rite.or.jp.
Research Institute of Innovative Technology for the Earth · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reinforcing microbial thermotolerance is a strategy to enable fermentation with flexible temperature settings and thereby to save cooling costs. Here, we report on adaptive laboratory evolution (ALE) of the amino acid-producing bacterium Corynebacterium glutamicum under thermal stress. After 65 days of serial passage of the transgenic strain GLY3, in which the glycolytic pathway is optimized for alanine production under oxygen deprivation, three strains adapted to supraoptimal temperatures were isolated, and all the mutations they acquired were identified by whole-genome resequencing. Of the 21 mutations common to the three strains, one large deletion and two missense mutations were found to promote growth of the parental strain under thermal stress. Additive effects on thermotolerance were observed among these mutations, and the combination of the deletion with the missense mutation on otsA, encoding a trehalose-6-phosphate synthase, allowed the parental strain to overcome the upper limit of growth temperature. Surprisingly, the three evolved strains acquired cross-tolerance for isobutanol, which turned out to be partly attributable to the genomic deletion associated with the enhanced thermotolerance. The deletion involved loss of two transgenes, pfk and pyk, encoding the glycolytic enzymes, in addition to six native genes, and elimination of the transgenes, but not the native genes, was shown to account for the positive effects on thermal and solvent stress tolerance, implying a link between energy-producing metabolism and bacterial stress tolerance. Overall, the present study provides evidence that ALE can be a powerful tool to refine the phenotype of C. glutamicum and to investigate the molecular bases of stress tolerance.

Indexed as

Adaptation, BiologicalHot TemperatureCorynebacterium glutamicumDNA, BacterialGene Expression ProfilingGenome, BacterialMolecular Sequence DataMutation, MissenseOrganisms, Genetically ModifiedSequence Analysis, DNASequence DeletionSerial PassageSolventsDNA, BacterialSolvents

Identifiers

PMID25595768
PMCPMC4357955
OpenAlexW2024679845

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.