Evidence map›Paper›PMID 25593565›Full record

ArticleClinical proteomics2014

Quantifying CD4 receptor protein in two human CD4+ lymphocyte preparations for quantitative flow cytometry.

Meiyao Wang, Martin Misakian, Hua-Jun He, Peter Bajcsy, Fatima Abbasi, Jeffrey M Davis, Kenneth D Cole, Illarion V Turko, Lili Wang

Open access · goldAbstract read
In one paragraph

Article in Clinical proteomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  3. Standardization of flow cytometric detection of antigen expression.Cytometry. Part B, Clinical cytometry · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Meiyao WangInstitute for Bioscience and Biotechnology Research, University of Maryland, 9600 Gudelsky Drive, Rockville, MD 20850 USA ; Biomolecular Measurement Division, National Institute of Standards and Technology (NIST), Gaithersburg, MD 20899 USA.
Martin MisakianQuantum Measurements Division, NIST, 100 Bureau Drive, Stop 8312, Gaithersburg, MD 20899 USA.
Hua-Jun HeBiosystems and Biomaterials Division, NIST, 100 Bureau Drive, Stop 8312, Gaithersburg, MD 20899 USA.
Peter BajcsySoftware and Systems Division, NIST, 100 Bureau Drive, Stop 8312, Gaithersburg, MD 20899 USA.
Fatima AbbasiLaboratory of Stem Cell Biology, Cellular and Tissue Therapy Branch, Division of Cell and Gene Therapies, CBER FDA, 8800 Rockville Pike, Bethesda, MD 20892 USA.
Jeffrey M DavisMaterials Measurement Science Division, NIST, 100 Bureau Drive, Stop 8312, Gaithersburg, MD 20899 USA.
Kenneth D ColeBiosystems and Biomaterials Division, NIST, 100 Bureau Drive, Stop 8312, Gaithersburg, MD 20899 USA.
Illarion V TurkoInstitute for Bioscience and Biotechnology Research, University of Maryland, 9600 Gudelsky Drive, Rockville, MD 20850 USA ; Biomolecular Measurement Division, National Institute of Standards and Technology (NIST), Gaithersburg, MD 20899 USA.
Lili WangBiosystems and Biomaterials Division, NIST, 100 Bureau Drive, Stop 8312, Gaithersburg, MD 20899 USA.
National Institute of Standards and Technology · USCell and Tissue Systems (United States) · USMaterial Measurement Laboratory · USUniversity of Maryland, Baltimore · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn our previous study that characterized different human CD4+ lymphocyte preparations, it was found that both commercially available cryopreserved peripheral blood mononuclear cells (PBMC) and a commercially available lyophilized PBMC (Cyto-Trol™) preparation fulfilled a set of criteria for serving as biological calibrators for quantitative flow cytometry. However, the biomarker CD4 protein expression level measured for T helper cells from Cyto-Trol was about 16% lower than those for cryopreserved PBMC and fresh whole blood using flow cytometry and mass cytometry. A primary reason was hypothesized to be due to steric interference in anti- CD4 antibody binding to the smaller sized lyophilized control cells.

methodTargeted multiple reaction monitoring (MRM) mass spectrometry (MS) is used to quantify the copy number of CD4 receptor protein per CD4+ lymphocyte. Scanning electron microscopy (SEM) is utilized to assist searching the underlying reasons for the observed difference in CD4 receptor copy number per cell determined by MRM MS and CD4 expression measured previously by flow cytometry.

resultsThe copy number of CD4 receptor proteins on the surface of the CD4+ lymphocyte in cryopreserved PBMCs and in lyophilized control cells is determined to be (1.45 ± 0.09) × 10(5) and (0.85 ± 0.11) × 10(5), respectively, averaged over four signature peptides using MRM MS. In comparison with cryopreserved PBMCs, there are more variations in the CD4 copy number in lyophilized control cells determined based on each signature peptide. SEM images of CD4+ lymphocytes from lyophilized control cells are very different when compared to the CD4+ T cells from whole blood and cryopreserved PBMC.

conclusionBecause of the lyophilization process applied to Cyto-Trol control cells, a lower CD4 density value, defined as the copy number of CD4 receptors per CD4+ lymphocyte, averaged over three different production lots is most likely explained by the loss of the CD4 receptors on damaged and/or broken microvilli where CD4 receptors reside. Steric hindrance of antibody binding and the association of CD4 receptors with other biomolecules likely contribute significantly to the nearly 50% lower CD4 receptor density value for cryopreserved PBMC determined from flow cytometry compared to the value obtained from MRM MS.

Indexed as

CD4 receptor densityCell surface areaCryopreserved peripheral blood mononuclear cells (PBMC)Flow cytometryLyophilized Cyto-Trol™MicrovilliMultiple reaction monitoring (MRM) mass spectrometry (MS)Scanning electron microscopy (SEM)

Identifiers

PMID25593565
PMCPMC4277840
OpenAlexW2103705618

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.