Evidence map›Paper›PMID 25593315›Full record

ArticleThe Journal of biological chemistry2015

Regulation of the sarcoplasmic reticulum calcium pump by divergent phospholamban isoforms in zebrafish.

Przemek A Gorski, Catharine A Trieber, Ghazaleh Ashrafi, Howard S Young

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Przemek A GorskiFrom the Department of Biochemistry and.
Catharine A TrieberFrom the Department of Biochemistry and National Institute for Nanotechnology, University of Alberta, Edmonton, Alberta T6G 2H7, Canada.
Ghazaleh AshrafiFrom the Department of Biochemistry and.
Howard S YoungFrom the Department of Biochemistry and National Institute for Nanotechnology, University of Alberta, Edmonton, Alberta T6G 2H7, Canada hyoung@ualberta.ca.
University of Alberta · CANational Institute for Nanotechnology · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sarcoplasmic reticulum calcium pump (SERCA) is regulated by the small integral membrane proteins phospholamban (PLN) and sarcolipin (SLN). These regulators have homologous transmembrane regions, yet they differ in their cytoplasmic and luminal domains. Although the sequences of PLN and SLN are practically invariant among mammals, they vary in fish. Zebrafish (zf) appear to harbor multiple PLN isoforms, one of which contains 18 sequence variations and a unique luminal extension. Characterization of this isoform (zfPLN) revealed that SERCA inhibition and reversal by phosphorylation were comparable with human PLN. To understand the sequence variations in zfPLN, chimeras were created by transferring the N terminus, linker, and C terminus of zfPLN onto human PLN. A chimera containing the N-terminal domain resulted in a mild loss of function, whereas a chimera containing the linker domain resulted in a gain of function. This latter effect was due to changes in basic residues in the linker region of PLN. Removing the unique luminal domain of zfPLN ((53)SFHGM) resulted in loss of function, whereas adding this domain to human PLN had a minimal effect on SERCA inhibition. We conclude that the luminal extension contributes to SERCA inhibition but only in the context of zfPLN. Although this domain is distinct from the SLN luminal tail, zfPLN appears to use a hybrid PLN-SLN inhibitory mechanism. Importantly, the different zebrafish PLN isoforms raise the interesting possibility that sarcoplasmic reticulum calcium handling and cardiac contractility may be regulated by the differential expression of PLN functional variants.

Indexed as

Amino Acid SequenceAnimalsCalciumCalcium-Binding ProteinsHumansModels, MolecularMolecular Sequence DataPhospholambanProtein IsoformsSarcoplasmic ReticulumSarcoplasmic Reticulum Calcium-Transporting ATPasesSequence AlignmentZebrafishZebrafish ProteinsCalciumCalcium-Binding ProteinsPhospholambanProtein IsoformsSarcoplasmic Reticulum Calcium-Transporting ATPasesZebrafish ProteinsCalcium ATPaseCardiac MuscleMembrane Transporter ReconstitutionPhospholambanProtein ChimeraSarcolipinSarcoplasmic Reticulum (SR)Zebrafish

Identifiers

PMID25593315
PMCPMC4358104
OpenAlexW2001557690

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.