Evidence map›Paper›PMID 25591173›Full record

ArticleVirology2015

Strain-specific interaction of a GII.10 Norovirus with HBGAs.

Miao Jin, Ming Tan, Ming Xia, Chao Wei, Pengwei Huang, Leyi Wang, Weiming Zhong, Zhaojun Duan, Xi Jiang

Open access · greenAbstract read
In one paragraph

Article in Virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  3. Evolutionary Analysis of theFrontiers in microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Miao JinNational Institute for Viral Disease Control and Prevention, China CDC, 155 Changbai Road Street, Chang-ping District, Beijing 102206, China.
Ming TanDivisions of Infectious Diseases, Cincinnati Children׳s Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH, USA; Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Ming XiaDivisions of Infectious Diseases, Cincinnati Children׳s Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH, USA.
Chao WeiDivisions of Infectious Diseases, Cincinnati Children׳s Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH, USA.
Pengwei HuangDivisions of Infectious Diseases, Cincinnati Children׳s Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH, USA.
Leyi WangDivisions of Infectious Diseases, Cincinnati Children׳s Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH, USA.
Weiming ZhongDivisions of Infectious Diseases, Cincinnati Children׳s Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH, USA.
Zhaojun DuanNational Institute for Viral Disease Control and Prevention, China CDC, 155 Changbai Road Street, Chang-ping District, Beijing 102206, China. Electronic address: zhaojund@126.com.
Xi JiangDivisions of Infectious Diseases, Cincinnati Children׳s Hospital Medical Center, 3333 Burnet Avenue, Cincinnati, OH, USA; Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA. Electronic address: jason.jiang@cchmc.org.
Cincinnati Children's Hospital Medical Center · USChinese Center For Disease Control and Prevention · CN

Funding

VIRAL GASTROENTERITIS PATHOGENSP01HD013021 · NICHD · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MORROW, ARDYTHE L · 1985 to 2013
$15.0M
Novel vaccine against NorovirusR01AI089634 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI JIANG, XI · 2010 to 2014
$4.7M
Characterization of Human CalicivirusesR01AI037093 · NIAID · EASTERN VIRGINIA MEDICAL SCHOOL · PI JIANG, XI · 1997 to 2010
$2.8M
Norwalk-like Viruses and Their ReceptorsR01AI055649 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI JIANG, XI · 2005 to 2009
$1.4M
Norovirus P Particle, A Multifunctional Platform For Vaccine DevelopmentR21AI092434 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI TAN, MING · 2011 to 2012
$421k
NIAID NIH HHS R01 AI037093NIAID NIH HHS R01 AI055649NIAID NIH HHS R01AI055649NIAID NIH HHS R01 AI089634NIAID NIH HHS R01AI089634NIAID NIH HHS R01AI37093NIAID NIH HHS R21 AI092434NIAID NIH HHS R21AI092434-01A1NICHD NIH HHS P01 HD013021NICHD NIH HHS P01HD13021
6 · The paper itself

Abstract

Noroviruses (NoVs), an important cause of gastroenteritis in humans, recognize human histo-blood group antigens (HBGAs) as receptors. The crystal structures of the protruding (P) domain of a GII.10 NoV (Vietnam 026) in complex with various HBGA oligosaccharides were elucidated. However, the HBGA binding profile of this virus remains unknown. In this study, we determined the saliva and oligosaccharide binding profiles of this virus and the roles of amino acids that are involved in HBGA binding. Our data showed that Vietnam 026 bound to all ABO secretor and non-secretor saliva with clear signals detected by monoclonal antibodies against H3, H1, Le(y), Le(a) and sialyl Le(a). Mutagenesis study confirmed the binding site determined by the crystallography study, in which single mutations wiped out the binding function. We also identified amino acids surrounding the central binding pocket that may participate in the binding by affecting the HBGA binding specificity of the GII.10 NoV.

Indexed as

Amino Acid SequenceBlood Group AntigensCaliciviridae InfectionsGastroenteritisHumansModels, MolecularMolecular Sequence DataNorovirusProtein BindingProtein Structure, TertiaryReceptors, VirusSpecies SpecificityViral Nonstructural ProteinsBlood Group AntigensReceptors, VirusViral Nonstructural ProteinsAcute gastroenteritisHuman histo-blood group antigensMutagenesisNorovirusesOligosaccharideSaliva

Identifiers

PMID25591173
PMCPMC12409746
OpenAlexW1989728882

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.