Evidence map›Paper›PMID 25591119›Full record

ArticleMolecules (Basel, Switzerland)2015

Kinase inhibitor profile for human nek1, nek6, and nek7 and analysis of the structural basis for inhibitor specificity.

Eduardo Cruz Moraes, Gabriela Vaz Meirelles, Rodrigo Vargas Honorato, Tatiana de Arruda Campos Brasil de Souza, Edmarcia Elisa de Souza, Mario Tyago Murakami, Paulo Sergio Lopes de Oliveira, Jörg Kobarg

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. In Mitosis You Are Not: The NIMA Family of Kinases inInternational journal of molecular sciences · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Eduardo Cruz MoraesLaboratórioNacional de Biociências, Centro Nacional de PesquisaemEnergia e Materiais, Campinas, 13083-970 SP, Brazil. eduardo.moraes@bioetanol.org.br.
Gabriela Vaz MeirellesLaboratórioNacional de Biociências, Centro Nacional de PesquisaemEnergia e Materiais, Campinas, 13083-970 SP, Brazil. gabriela.meirelles@lnbio.cnpem.br.
Rodrigo Vargas HonoratoLaboratórioNacional de Biociências, Centro Nacional de PesquisaemEnergia e Materiais, Campinas, 13083-970 SP, Brazil. rodrigo.honorato@lnbio.cnpem.br.
Tatiana de Arruda Campos Brasil de SouzaInstituto Carlos Chagas, FIOCRUZ, Curitiba, 81350-010 PR, Brazil. tatiana.brasil@gmail.com.
Edmarcia Elisa de SouzaLaboratórioNacional de Biociências, Centro Nacional de PesquisaemEnergia e Materiais, Campinas, 13083-970 SP, Brazil. edmarcia.souza@lnbio.cnpem.br.
Mario Tyago MurakamiLaboratórioNacional de Biociências, Centro Nacional de PesquisaemEnergia e Materiais, Campinas, 13083-970 SP, Brazil. mario.murakami@lnbio.cnpem.br.
Paulo Sergio Lopes de OliveiraLaboratórioNacional de Biociências, Centro Nacional de PesquisaemEnergia e Materiais, Campinas, 13083-970 SP, Brazil. paulo.oliveira@lnbio.cnpem.br.
Jörg KobargPrograma de Pós-graduação em Biologia Funcional e Molecular, Departamento de Bioquímica e BiologiaTecidual, Instituto de Biologia, UniversidadeEstadual de Campinas, Campinas, 13083-862 SP, Brazil. jorgkoba@unicamp.br.
Universidade Estadual de Campinas (UNICAMP) · BRLaboratório Nacional de Ciência e Tecnologia do Bioetanol · BRFundação Carlos Chagas · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human Neks are a conserved protein kinase family related to cell cycle progression and cell division and are considered potential drug targets for the treatment of cancer and other pathologies. We screened the activation loop mutant kinases hNek1 and hNek2, wild-type hNek7, and five hNek6 variants in different activation/phosphorylation statesand compared them against 85 compounds using thermal shift denaturation. We identified three compounds with significant Tm shifts: JNK Inhibitor II for hNek1(Δ262-1258)-(T162A), Isogranulatimide for hNek6(S206A), andGSK-3 Inhibitor XIII for hNek7wt. Each one of these compounds was also validated by reducing the kinases activity by at least 25%. The binding sites for these compounds were identified by in silico docking at the ATP-binding site of the respective hNeks. Potential inhibitors were first screened by thermal shift assays, had their efficiency tested by a kinase assay, and were finally analyzed by molecular docking. Our findings corroborate the idea of ATP-competitive inhibition for hNek1 and hNek6 and suggest a novel non-competitive inhibition for hNek7 in regard to GSK-3 Inhibitor XIII. Our results demonstrate that our approach is useful for finding promising general and specific hNekscandidate inhibitors, which may also function as scaffolds to design more potent and selective inhibitors.

Indexed as

Cell Cycle ProteinsHumansMolecular Docking SimulationNIMA-Related Kinase 1NIMA-Related KinasesProtein Kinase InhibitorsProtein Serine-Threonine KinasesRecombinant ProteinsSubstrate SpecificityCell Cycle ProteinsNEK1 protein, humanNEK6 protein, humanNEK7 protein, humanNIMA-Related Kinase 1NIMA-Related KinasesProtein Kinase InhibitorsProtein Serine-Threonine KinasesRecombinant Proteins

Identifiers

PMID25591119
PMCPMC6272266
OpenAlexW1993558290

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.