Evidence map›Paper›PMID 25591003›Full record

ArticleCell cycle (Georgetown, Tex.)2015

Structural convergence of unstructured p53 family transactivation domains in MDM2 recognition.

Jae-Sun Shin, Ji-Hyang Ha, Dong-Hwa Lee, Kyoung-Seok Ryu, Kwang-Hee Bae, Byoung Chul Park, Sung Goo Park, Gwan-Su Yi, Seung-Wook Chi

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. New insights into cancer: MDM2 binds to the citrullinating enzyme PADI4.Protein science : a publication of the Protein Society · 2023
    Article
  3. Article
  4. Structural Basis of Mutation-Dependent p53 Tetramerization Deficiency.International journal of molecular sciences · 2022
    Article
  5. Structural diversity of p63 and p73 isoforms.Cell death and differentiation · 2022
    Review
  6. Article
  7. Article
  8. AlphaSpace 2.0: Representing Concave Biomolecular Surfaces Using β-Clusters.Journal of chemical information and modeling · 2020
    Article
  9. Article
  10. Regulation of the p53 Family Proteins by the Ubiquitin Proteasomal Pathway.International journal of molecular sciences · 2019
    Review
  11. Article
  12. Article
  13. Article
  14. Evolution of the p53-MDM2 pathway.BMC evolutionary biology · 2017
    Article
  15. The Regulation of Tumor Suppressor p63 by the Ubiquitin-Proteasome System.International journal of molecular sciences · 2016
    Review
  16. Review
  17. Accelerating physical simulations of proteins by leveraging external knowledge.Wiley interdisciplinary reviews. Computational molecular science
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 4 countries.

Jae-Sun Shina Structural Biology & Nanopore Research Laboratory; Functional Genomics Research Center; KRIBB ; Daejeon , Republic of Korea.
Ji-Hyang Ha
Dong-Hwa Lee
Kyoung-Seok Ryu
Kwang-Hee Bae
Byoung Chul Park
Sung Goo Park
Gwan-Su Yi
Seung-Wook Chi
Daejeon University · KROdiham Cottage Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The p53, p63, and p73 proteins belong to the p53 family of transcription factors, which play key roles in tumor suppression. Although the transactivation domains (TADs) of the p53 family are intrinsically disordered, these domains are commonly involved in the regulatory interactions with mouse double minute 2 (MDM2). In this study, we determined the solution structure of the p73TAD peptide in complex with MDM2 using NMR spectroscopy and biophysically characterized the interactions between the p53 family TAD peptides and MDM2. In combination with mutagenesis data, the complex structures revealed remarkably close mimicry of the MDM2 recognition mechanism among the p53 family TADs. Upon binding with MDM2, the intrinsically disordered p73TAD and p63TAD peptides adopt an amphipathic α-helical conformation, which is similar to the conformation of p53TAD, although the α-helical content induced by MDM2 binding varies. With isothermal titration calorimetry (ITC) and circular dichroism (CD) data, our biophysical characterization showed that p73TAD resembles p53TAD more closely than p63TAD in terms of helical stability, MDM2 binding affinity, and phosphorylation effects on MDM2 binding. Therefore, our structural information may be useful in establishing alternative anticancer strategies that exploit the activation of the p73 pathway against human tumors bearing p53 mutations.

Indexed as

Models, MolecularAmino Acid SequenceCircular DichroismDNA-Binding ProteinsGene ComponentsHumansMagnetic Resonance SpectroscopyMolecular Sequence DataMultiprotein ComplexesNuclear ProteinsProtein BindingProtein ConformationProto-Oncogene Proteins c-mdm2Transcriptional ActivationTranscription FactorsTumor Protein p73DNA-Binding ProteinsMDM2 protein, humanMultiprotein ComplexesNuclear ProteinsProto-Oncogene Proteins c-mdm2TP63 protein, humanTP73 protein, humanTranscription FactorsTrp73 protein, mouseTumor Protein p73Tumor Suppressor Protein p53Tumor Suppressor ProteinsAIRs, Ambiguous interaction restraintscomplex structureHSQC, heteronuclear single quantum coherenceIDP, Intrinsically disordered proteinITC, Isothermal titration calorimetryMDM2MDM2, mouse double minute 2NMRNMR, nuclear magnetic resonanceNOESY, nuclear Overhauser effect spectroscopyp53 familyp73RDC, Residual dipolar couplingTAD, transactivation domaintransactivation domain

Identifiers

PMID25591003
PMCPMC4614862
OpenAlexW1840818938

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.