Evidence map›Paper›PMID 25590650›Full record

ArticleeLife2015

Reliable cell cycle commitment in budding yeast is ensured by signal integration.

Xili Liu, Xin Wang, Xiaojing Yang, Sen Liu, Lingli Jiang, Yimiao Qu, Lufeng Hu, Qi Ouyang, Chao Tang

Abstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Experimental evolution of cellular miniaturization reveals a putative mechanism for cell size evolution.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. TOR Complex 1: Orchestrating Nutrient Signaling and Cell Cycle Progression.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Mad3 modulates the GScience advances · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. What programs the size of animal cells?Frontiers in cell and developmental biology · 2022
    Review
  17. Article
  18. Article
  19. Cell-size regulation in budding yeast does not depend on linear accumulation of Whi5.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xili LiuCenter for Quantitative Biology, Peking University, Beijing, China.
Xin WangCenter for Quantitative Biology, Peking University, Beijing, China.
Xiaojing YangCenter for Quantitative Biology, Peking University, Beijing, China.
Sen LiuInstitute of Molecular Biology, College of Medical Science, China Three Gorges University, Yichang, China.
Lingli JiangCenter for Quantitative Biology, Peking University, Beijing, China.
Yimiao QuCenter for Quantitative Biology, Peking University, Beijing, China.
Lufeng HuCenter for Quantitative Biology, Peking University, Beijing, China.
Qi OuyangCenter for Quantitative Biology, Peking University, Beijing, China.
Chao TangCenter for Quantitative Biology, Peking University, Beijing, China.

Funding

Rewiring Therapeutic Cells: User-Controlled T Cells and Stem CellsP50GM081879 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIM, WENDELL A · 2010 to 2017
$19.0M
Quantitative studies of cell cycle checkpoints and switchesR01GM097115 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MORGAN, DAVID OWEN · 2011 to 2014
$1.5M
NIGMS NIH HHS P50 GM081879NIGMS NIH HHS R01 GM097115
6 · The paper itself

Abstract

Cell fate decisions are critical for life, yet little is known about how their reliability is achieved when signals are noisy and fluctuating with time. In this study, we show that in budding yeast, the decision of cell cycle commitment (Start) is determined by the time integration of its triggering signal Cln3. We further identify the Start repressor, Whi5, as the integrator. The instantaneous kinase activity of Cln3-Cdk1 is recorded over time on the phosphorylated Whi5, and the decision is made only when phosphorylated Whi5 reaches a threshold. Cells adjust the threshold by modulating Whi5 concentration in different nutrient conditions to coordinate growth and division. Our work shows that the strategy of signal integration, which was previously found in decision-making behaviors of animals, is adopted at the cellular level to reduce noise and minimize uncertainty.

Indexed as

Cell CycleSignal TransductionG1 PhaseSaccharomyces cerevisiae ProteinsSaccharomycetalesTime FactorsSaccharomyces cerevisiae Proteinscell biologycell cyclecell decision-makingcell size controlCln3 integrationS. cerevisiaeWhi5 phosphorylation

Identifiers

PMID25590650
PMCPMC4378612

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.